FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661459

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661459
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCATCGGCTACACCCTCGACGAGGTCCCCAACGACATCACCGAGGAGAC33.5294117647058822No Hit
TGGACGGGCTGCCCGACGTCTCCCGCGTTGCAGCGGGCCTGGCCATGATG33.5294117647058822No Hit
GCACCAGCAGGTTCCCGGTGTCACCGACCGCGGCGACCACCTTCCCCGGC33.5294117647058822No Hit
ATCCGGGATCGCCGTGGGCCATCGGATCGTCTGATGGCGGCCATGACACC22.3529411764705883No Hit
CACCCGTGGCGTTGAGGTAGACGACGGTGGTGCCGTAGCCGGAGACCGTG22.3529411764705883No Hit
GGCTCTTGTGTAAGAATTCTGACCACACTAACCATGCCTAGGAAGGAAAG22.3529411764705883No Hit
GGGCAAAGACATGCTGCTTGTGGCTGCAGGAGGGAAAGCCATGGTCATCC22.3529411764705883No Hit
GCTGGCGGCCCGCACACGAGGCCTGGATACCTGTTCGCAGATGGCGTGGA22.3529411764705883No Hit
GACGGAGTCTCGCTCTGTCACCTAGGCTGGTGTGCAGTGGTGCAATGTAA22.3529411764705883No Hit
GCCTTGCAAAGTGCTGGGATTATAGGCATAAACCACCGTGCCTGGCCTCA22.3529411764705883No Hit
GCCCCACTGCGGCACCATCACAATGCAGCGGATCTCCTTCACCTGGGGGT22.3529411764705883No Hit
CCTGGGCAAAAATTGTGGTACCGGTCCTTTGCAAGGTTATGCATGGTCAA11.1764705882352942No Hit
CCCCTCAGTTATTTCCTGATTTCTCCCCCAAAGAGCTTCAGAATGTCTGC11.1764705882352942No Hit
CGCTAATCGACGCGTATGTCATTAACAACGATGAAGTGAAAGCCTATGTC11.1764705882352942No Hit
GAGCGCTCTCAGAACCCTTTGGAATAGTAAGTGTTAACATTTCTGATTGA11.1764705882352942No Hit
TACCAGTACCATATGCTGCATTCCCACCCCTTATTTCTAGTGATCCATTT11.1764705882352942No Hit
CTGCTCGACCCCGCCCAGGCGCGCCAGGAGACGGTCTCGGCCGACACGCT11.1764705882352942No Hit
CTCCACGACCACCGGTTGTCCGAGCGTCTTGCTCATCTCGATGCCGATGG11.1764705882352942No Hit
GAACTTCTCATCCCATGGAGTAATCAGCAGATATTTAGTCATAGTTTCTT11.1764705882352942No Hit
CTTGATTATATTGCAAAGACCCTATTTCCAAATAAGGTCACATTCACAGG11.1764705882352942No Hit
CAGGCCTGAAAGCGCTTAAAACGTCCGCTTGCAGATACTACAGAAAGAGT11.1764705882352942No Hit
CTCCAACTGTTTTAAAGTCCTTCGTTTCTCCTTTTACATAGGCATCCAAA11.1764705882352942No Hit
AAATTATGGTGTGGATTGAAAGACAAAATAGGAAACATGTCAATTCTCTC11.1764705882352942No Hit
GCTCAGGCCTCGTCGATGTCGATGGACTCGATGACGACGTCCTCGAGCGG11.1764705882352942No Hit
AATCTAGACAGAAGAATTCTCCGAAACTTCTTTGGTTGTGTGCATTCAAG11.1764705882352942No Hit
TCCAGCAGTCCATCGACACGCTGTTCCAGGAGGGCCTGCTGGGCCTGGCG11.1764705882352942No Hit
GAAGACCGTGTCCCCGAATCGATCGCGGATGGCCGCCAGCGCCGGCTCCC11.1764705882352942No Hit
ATATAGCGACGACATGCCGCTGTTCGAACAGTTTCTGCGCGACTGGGACG11.1764705882352942No Hit
GCTGGTGGAGGAGGTGCTGGGACCGCTCCGGGCGCTGCCCGCGGACCAGC11.1764705882352942No Hit
AATAAAGAAAGAGGTTTAATGGACTTACAGTTCCATGTGGCTGGGGAAGC11.1764705882352942No Hit
GTGCTTGCGTACGACGAGCACGCGACCGGCGGGATCCAGGATCACGGCGG11.1764705882352942No Hit
GGCCGTATGGATATGGTCGAAGATGATTTCGGTCTTGAAGCGCTCGGCAT11.1764705882352942No Hit
GTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGG11.1764705882352942No Hit
GCCAAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAA11.1764705882352942No Hit
TTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGC11.1764705882352942No Hit
GGCATGCAAGACAGAGTCCTTTGAGGTCCAGTAAAGGCTGCACTGATGAG11.1764705882352942No Hit
GAATAAAGAGACAATGTGCTAGAATCTCTGGGACACAGCTAAAGCAGTGT11.1764705882352942No Hit
GAGCAGGCGTGGCCGCTGGTCTCCTTCACGTTCGGCCTGCCGGCCGCGGA11.1764705882352942No Hit
TAATAATATTATATATCATACTGGAAATGTGCTTAGAAAGTAGATTGTAG11.1764705882352942No Hit
GTGCAGATCTTGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGC11.1764705882352942No Hit
CATTCGATCCCATTCCATTCGATTCCATTCCATACTATTGCTGTCTCTTA11.1764705882352942No Hit
GAATGGAATGGAATGGAATGGAATGGAATGCAATGGAATGGAATCAGCCC11.1764705882352942No Hit
TTTCTGCATCTATTGAGGTAATCATGTGGTTTTTGTCTTTGGTTCTGTTT11.1764705882352942No Hit
CTGTAAAGATTAAAGAAGAAAAATAATTGTCCCTCCAGTGGCACTTGCCA11.1764705882352942No Hit
GTACAACAAAGTGTGCAGCTTGCCAATGCTCTTGACCTAACCAAGCGATA11.1764705882352942No Hit
GTGCCCGTCGGCTCTGACGTGCCGGCCGCCGTCGCTGCGGTCCTGGGATG11.1764705882352942No Hit
GACTACAGGCATGTGCCACCACACCCAGCTATTTTTTTGTATTTTTTGTA11.1764705882352942No Hit
GTGCAATGGCAGATCTCGGCTTACTGCAACCTCCACCTCCCAGGTTCAAG11.1764705882352942No Hit
GCCATGGAGGTCGGCAGCAACCATTCCAGCGCTCGCTGGCAGCCGGGCGA11.1764705882352942No Hit
TCCATGCCGTCAGCGCGGGCACGTTCGTGAACACCGGCAGCGCCTGCCGG11.1764705882352942No Hit
GCCACCAGGGACTTGGCCAGGTTGATGCGGTTCATCGCCTCGCCCGTGGA11.1764705882352942No Hit
ATTCCACTCGGGTTGATTCCATTCTATTCCTTTCCATTCCATTCTTGTTG11.1764705882352942No Hit
GGTTTATTAATAGTCTTTTGTTCTCTGCTCACAGTTGCTGCTTGATTGAC11.1764705882352942No Hit
GAAGCAGTCTTAGAATCAATCTGAAATCCACCCTTTAGTATATTGTGGTC11.1764705882352942No Hit
GCATATGTTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCAT11.1764705882352942No Hit
GCGCACAACCGCAGTCTCACTTTCTCCAAAATCATAACTTCCATCGGCAA11.1764705882352942No Hit
ACATTATAATTAGCGTATAGTGAGCAGTGAGGATGACCAGAGGTCACTTT11.1764705882352942No Hit
CGCCAAGAGCACGCGTGGGTCGGAGTTCTACGACCTGTTGGGTGGTGGCC11.1764705882352942No Hit
AGCTGGAACACGTCGGCGGCGATCTCGGTCTCCCCGGCCATCACGGCGCG11.1764705882352942No Hit
GCACTTTGGGAGGCTGAGGCAGGCAGATCACTTGAGGTCGGGAGTTCGAG11.1764705882352942No Hit
GGCAAACTTTTGCATTTGCTTTTATTTTATTCTTTACAAAGGCTGAAATA11.1764705882352942No Hit
GATCATCATCATGATCGCCTGGGTTAGCGGGCGCCCGGAGAGCATGAGCA11.1764705882352942No Hit
GTATCAACGCAGAGTCATGGGAATAACGCCGCCGCATCGCCGGTCGGCAT11.1764705882352942No Hit
CATTCAATGACGTAGGCAATAGCAAACTATAAAAATAGATCCAACGACAT11.1764705882352942No Hit
GCAGTGCGGGCCAACGTCGAAAATCCCTCCGGGGCACGGGAGACGGAATC11.1764705882352942No Hit
ATATTCCATAAATTGACGGAAACGACCAAAAAGAGATCGATGAAGATTTT11.1764705882352942No Hit
TCTCCAGTCAACGCATACTTGAGTCTATTCCTGAGGAAGACGATCAGAGG11.1764705882352942No Hit
CTATGTGGTCGATCACGTCACGGGCGAAGTCGTCTGGCTTTTCGATGACG11.1764705882352942No Hit
GCCTGAAGCAGGCGCTGAAGGCGGGCGGCTTCGACGCCGCGTTCGGCGGC11.1764705882352942No Hit
GGTGGGGAGGAGAAAAAGCATGGTTCTTTTCCTAATGAATCTGGCCTTAT11.1764705882352942No Hit
GGTTTGAACTCATGAGAAAGCAAATAAAGATAACAATTAAAAGAATTAGT11.1764705882352942No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)