FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCAAGGGCATCGTGCGCGCCCTGTGGGACGCCGTGAAGTCGCAGTTCC33.5294117647058822No Hit
GCACCTGGACGATGCGACCGTCCGTGGGCGTGCGGGCGGCGTCGAGCAGG33.5294117647058822No Hit
TCTTGTGCCCGTGCAGCCGCCAGCCGCCGTCGACGCGCTCGGCGCGGGTC33.5294117647058822No Hit
ACCCCACCCTGTTTGTGAAAGACTGAAACAGACTATGGTCTCATTTGGTT22.3529411764705883No Hit
AAGCATTCCTGGTAGATACCGTCAGGGTCATTGTCGAAGTTGATCGGGTA22.3529411764705883No Hit
GCCTGGACCGCACTGAGGCCTGCGGCACCACGGGGCAGTCCCCCTACAGC22.3529411764705883No Hit
GTCCCATGAAGTTGTAGTTCCACGAGGACTGGGCAGGGACCATGAAGAAG22.3529411764705883No Hit
GGGCTACCGTCCCAGCTTGCAGACCCCTCTGTGACTGACACAGGTACTCT22.3529411764705883No Hit
GGCTGAAAATGTACAAAGATATGCATCCCTCCCCCACCAGTTAAATGCCA22.3529411764705883No Hit
CGATTAGTTGGTATGACAAGATTTCTAGAAGCCGCTGAAGCGTGTGAAGT22.3529411764705883No Hit
CCCAGAAACAGGTAGAATGCAGAGCCTTCTCTAGCGATGGGGGCCAGGAG11.1764705882352942No Hit
CCTGCACACCGCTCGCCACCGCCGTCAGAAGGCAGGCGACCCCCACGCCG11.1764705882352942No Hit
CATCACCCTCGGCGGTGACACGCTGGCCACCGGGCAGCAGGTCGGCCCGT11.1764705882352942No Hit
GATACCTACCGATCGTGATTGCTGTGTTTGGAAAGGGACAAACTGGCCTG11.1764705882352942No Hit
GTCCTTCAAGGGAAATTGACAAAAATAGCATTAAAACTATAGGTCAATTT11.1764705882352942No Hit
CACCAGCGAGAGCGAACGCGCCAGGTCCTTCGCGAGGTTGACGATCTGCG11.1764705882352942No Hit
GAGCAAAACGGACCATGCATAACCTGAGCAAAGAACCAGTGCCATAATTT11.1764705882352942No Hit
CGGCCGGACGCCCCGGTCGGGCGCCGGCGGGTGCTGACCCCGTCGCCGGT11.1764705882352942No Hit
GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGC11.1764705882352942No Hit
GAATCCTCCTTAACTTGTTTTATAAGGCCAGCATCATCCTGATACCAAAG11.1764705882352942No Hit
GGTGGCTGCTTTTAGGCCTACTATGGGTGTTAAATTTTTTACTCTCTCTA11.1764705882352942No Hit
GGATCTGTGCCTTATCAACCAAATTGTTTTGCCTATCCACCCCATGGTGC11.1764705882352942No Hit
TTTGTGATGTGTGTATTCAACTAACAGAGATGAACCTTTCTTTTTACAGA11.1764705882352942No Hit
GGATCTGTGCCTTACCAACCAAATTGTTTTGCCTATCCACCCCATGGTGC11.1764705882352942No Hit
ACTCAGGAGACTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTT11.1764705882352942No Hit
CCACCCGGCTGGGCGTGGTCCACTCGCGGTTCTCCACCAACACGTTCCCC11.1764705882352942No Hit
CATAAGAAGAGGGAGATTTGAAGGCACACAGACACACAGTGGGAAGAAGG11.1764705882352942No Hit
GCATATTACCTCACCCTTTGTTCCTCTCTGCAGCAATTCTTTCATCCAGA11.1764705882352942No Hit
CCGGGGAGCACGGCATCGGCACGCTCAAGAGCCGCTGGCTCGCCGACGAG11.1764705882352942No Hit
ACTGTAGGTTTATATGGAGTCATTGGAAGTTCTGATAGAAGTCTAAAAAT11.1764705882352942No Hit
TCATAGACCAGGCGGAAATGTTCACCTGTCTTCTCGATGCTGATGACATC11.1764705882352942No Hit
CACGTGGCGCTGGCCGCGGTGGCCCGGGGGGCCGCGATCATCGAGAAGCA11.1764705882352942No Hit
ATTTAATGCATTTGAAAGGAGCTGAACTTTTAAAATTCTGAACTGTCAGT11.1764705882352942No Hit
ATTCCACTCCATTCCGTTGCACTCGGGTTGATTCCACTCCATTCCATTCC11.1764705882352942No Hit
GCCGGCGGATGTTCTCCACCACCACGATCGCGTCGTCCACGACTCGGCCG11.1764705882352942No Hit
GGCACGCGCACCGGCGCGGGCGATCCAGTCGATCTCGCTCATGCTTCGGG11.1764705882352942No Hit
GGTTGTGCTGAATGCTTTTTAAACATTAACTAATTCTAAAGACAACCCTA11.1764705882352942No Hit
ATTAATAGCCTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACTGC11.1764705882352942No Hit
GAGCATCGGAGTATGGACGCACCAGCCTGTGCATTACGTCCGCGGGGCAG11.1764705882352942No Hit
GTAGATGACGGTGTTGCGGTGGCAGATCAGGTCCTCCGCGGCGAGGGTCG11.1764705882352942No Hit
GACCACCACCGACGTGGAAAACTGGCCGGCCGATCCGAACGGCGTGCAGG11.1764705882352942No Hit
CTTGTCAGAGGAGAAAAAGAAAATTTCTACGGTGGTGGCACACAGAATGG11.1764705882352942No Hit
ACTTTTCTATTTGTGGCAGCACCAGAGAAAATTTCAAAAATGACGGTGTC11.1764705882352942No Hit
CAATAGTATGGAATGGAATCGAATGGAATGGGATCGAATGCTGTCTCTTA11.1764705882352942No Hit
CTCTAATATCCGCTTGGAAATACTACAACCATGGCATTTCAAACTGCTCT11.1764705882352942No Hit
TCTTCAATCTCTGTAAACAAAGGATCAAGGTGACAAAAGAAGTGCCAATC11.1764705882352942No Hit
CCTGGGGCGACGCCTTCGTCGACGGCAACGATGCCTAGGATCGAGCCCAT11.1764705882352942No Hit
CAGTTGGACAGGGGAAACACGCGGATGCTCTCGCCCCGGTGGATGCGCGC11.1764705882352942No Hit
CGGCGGCCCCGGCTACCAGTTCGGCGACGAGATCCACCCCGAGCTGCAGT11.1764705882352942No Hit
GCTGAGATCGTGCCACTGCACTCCAGCCTGGGGGACAGAGCAAGACTCTG11.1764705882352942No Hit
TGGTATACAAGTGAGGGTGAAGAGTATGGTGCTGTAACATCTCAAGACTT11.1764705882352942No Hit
GTAGCTGGGACTACAGGCACCTGCCACCACGCCTGGCTAATTTTTGTATT11.1764705882352942No Hit
TAATGATGTCGGCCGCGGTAAACTTGATGATGGGCTTTAGCGCATCATTC11.1764705882352942No Hit
ACCTGGAAGGTGCCGTCATCGAAAAGCCAGACGACTTCGCCCGTGACGTG11.1764705882352942No Hit
CCTCTAATTGTAACTTATAAAACTGTGCAACAGTGTCCCAACCAGGATAT11.1764705882352942No Hit
GTCCAAATGAGCCTTGGAGTTGGGGCAAATTTGCGTGCACATTGAAGCCT11.1764705882352942No Hit
GGCCACGATGGTTCCTGGACTCAGTTCCTCCAGGACTGTGTACACTCGTG11.1764705882352942No Hit
GATCTTAGTTATTTCTTGTCTTCTGCTAGTTTTTGAATTTGTTTGCTCTT11.1764705882352942No Hit
GGTTAGGCATTCTTAGTCACAGGATGAGTTAGGAGGTCAGCACAAGATAC11.1764705882352942No Hit
CGCATGCGGCGAGAAGATGTCTGCGTTTCAAGTCTTGTCTCCTGAGGCGG11.1764705882352942No Hit
ATGTATGCATGGTAAAAGCAACTACAATCTACTTTCTAAGCACATTTCCA11.1764705882352942No Hit
GAGAAATAAAATCCTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACC11.1764705882352942No Hit
GTTTACCACTGACCTGTATCGCCAGAATGATACTGTCGTGATTGAGGATT11.1764705882352942No Hit
GGACCCGCTTGCCGTCGAAGCGGGACAGATCGACCTCAGTGTCGGCGGCA11.1764705882352942No Hit
CGCCAGCACCGTCGGCATCTCGGCGCGGGTCGGCTCCGCGGCCGGGTCCG11.1764705882352942No Hit
GCACCAGCCCGGCCGAGTGGACCGCCGTCATGTCGGCCCTGACGGACGGC11.1764705882352942No Hit
GCAGTGGCACGATCTTGGCTCACTGCAAGCTCGGCCTCCTGAGTTCACGC11.1764705882352942No Hit
CCATGAGGACCATAGTCTGAACATGCACTAGGGATTTTCTTTATGACTCT11.1764705882352942No Hit
GGTCACCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGAC11.1764705882352942No Hit
GAAGGAAACTTGCCCTTATAAAAGTGATCTGTCACTTTTATAAGGGCAAG11.1764705882352942No Hit
GGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATCAACCCGAGT11.1764705882352942No Hit
ATCTGAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGC11.1764705882352942No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)