FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661850

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661850
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138
Sequences flagged as poor quality0
Sequence length146
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTTTCTGCAATTTGCAAGTGGAGACTTCAAGCGCTTTGAGGCCAAAGG42.898550724637681No Hit
GGTTTCTCAACCTCGGCACTATTGGCATCCTGGGCTCTAGCCCTGTGGGA42.898550724637681No Hit
AGGACTTCCAGGACTATGTTGAATAAGAGTAGTGACAGGTGGCACCTTTG32.1739130434782608No Hit
GTCCTCAGCAGAAGCAGATGCTGGTGCCATGCTTCTTGTACAGTCTGCAG32.1739130434782608No Hit
CCCTTGTCCTCTTTCTCTGATTGATGGTTTGGGGATAGGCATGTAATCCA32.1739130434782608No Hit
ATTCCATTCAATTAGAGTCCATTCCATTCCATTTGAGTCCATTCCATTTG32.1739130434782608No Hit
GCTTACTGCTGACAAGCTATCCGCGAAAACTTGTCCACTTGCAAGGATTG32.1739130434782608No Hit
TTCTTGATGAGGCCGAACACGTCGGTGTTGGTGATCACACCGGAGAAGTT21.4492753623188406No Hit
GTCTAGATCTCTGTGATTCACAGACATCATGAAATTGTATGTTATTTCCA21.4492753623188406No Hit
ATACAATATCAAATGGAATTTTTAAGATATTTAAAATCTTTTGTCTGGAA21.4492753623188406No Hit
TGACCGGGCTGACTCAGTTGAGCGGGCTGACTCAGTTGACCTGGCTGATG21.4492753623188406No Hit
CTCCTGATCAGCCTTGACTGAAATAGCGGTGCCATGACAATCCGAGCCGG21.4492753623188406No Hit
GAAGTTCAGTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCT21.4492753623188406No Hit
GATTTTTTTAATGCAATTTGTACCCAGCCACTTTTCATGATTTCTTAATA21.4492753623188406No Hit
ATCCGTGCTTGACTGAATAACTAGTGGGTAGAAATCTTGAGGGGATGAGT21.4492753623188406No Hit
GATCACGCCATTGCATTCCAGCCTGGGGCAACAAGAGCAAAACTCTGTCT21.4492753623188406No Hit
CATGCCTAAACTCGAGTCCTACGTGCACTACTGCAACGTCGACGTCTCCT21.4492753623188406No Hit
GGTTAAAAACCCTCAGTAAACTAGGTATTGAAGGAACATGCCTCAAAATA21.4492753623188406No Hit
CATACAGCCCGCGCACCATCAGATCGGTAAACACCAGCATTACTCCGATC21.4492753623188406No Hit
ATTTTGAAATCTCTCTCATAGAGCTCACGTATGGATTCGTGATCGGCGTT21.4492753623188406No Hit
GAAATGGAATCGAAATGAATGGAGTGTTATGGAACGGACTCAAAAGGAAT21.4492753623188406No Hit
ATTCTAAATTGTAAAACTAAGGCACGCAGAGGGGGAGATTTGAAGAGAAA21.4492753623188406No Hit
GTTTAACCGCCTGCTGGAGCAGAGAAAAGCCATCGTCGAGGATACACCCG21.4492753623188406No Hit
GTCGACGAGCTGCAGAGCGAACACCAGCGACAGGGACACCCCGCTGTCTC21.4492753623188406No Hit
TAGTTACTGCAACATAGGCTGCTCTCGGGTTTTTAAGGAAGAGTGTAGTT10.7246376811594203No Hit
AGAGTGTGCTTGTTCATGTTCCCCCTTTGATTAAGAATACAGCCTCAGAA10.7246376811594203No Hit
GGATTACAGGCATGTGCCACCACGCCTGGCTAATTGTTTTCTATTTTTAG10.7246376811594203No Hit
GGAGAGGGAGGTTGCAGTGAGCTGAGATCACTGCACTCTAGCCTGGGCAA10.7246376811594203No Hit
CTGCCTGTCTCACTGTGTCTGTCTTCTATCTTACTCTCTTTCTCTCCCCG10.7246376811594203No Hit
ATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGA10.7246376811594203No Hit
GACTTAAATTAGGGTTTTCAAAGGGCTCTGTCTCTCTTTCTACTGGAAAT10.7246376811594203No Hit
GAGCCAAGATCACGCCACTGCACTCCAGAAACTGATGGAGAAGAAACATG10.7246376811594203No Hit
CTAGAGAAGTAGCATTGGGGTAGATAAACAAGGTCAAAGTCAAGACTTTT10.7246376811594203No Hit
GTAACCTGAGACTTACTTTCATTATAGCCTACCACCCAGCAGAGAGGCTG10.7246376811594203No Hit
TGGTGGCACATGCCTGTAGTCCTAGCTACTGGGGAGGCTAAGGCTGGGGG10.7246376811594203No Hit
GGATTGTTTAATTGGAAGATAGGCCAGCAAAAACTATCCAGATTAATGCA10.7246376811594203No Hit
CAGTTTCATCGTATGTACCGAGGGAAAAATCCGACCGGGAGGTTGCTCAC10.7246376811594203No Hit
TTCCATTCCATGAGGATTCCATGTGATTCCATTCGATGATGATTCATTTC10.7246376811594203No Hit
TACATACAGTGGGACCCTATTCAGCCAGAAAAAGGAAGGAAGCGGGTGTG10.7246376811594203No Hit
CTCCTATTCACCGTTCTCAACTACGCATACATGCCCTGCTCTTGTTTACA10.7246376811594203No Hit
GTGCTGAACATCTCCTCGGGCCTGGGCCGCAACGCCATGGGCAGCCAGGC10.7246376811594203No Hit
TCTTAACACAGTCTTTTCTTCTTACCTGTATCTCCAACTGCCTACTAGAA10.7246376811594203No Hit
ATTTGGAAGGTTTTAGAATGATACAAACCAAAGAACTAATGACAACGTCC10.7246376811594203No Hit
GCCAAGTTAAATTGCATGGTCTTCAAAGCAGCCCATTGACTAAAAACATT10.7246376811594203No Hit
GGGGTGAATGGAAGGGCCCACCTGGACCCTGGAGGGACACCAGGCTCATA10.7246376811594203No Hit
ATGATTCCATTCGATTCCATTCAATGATGATTCCATTCGAGTTCATTGAC10.7246376811594203No Hit
CCCTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATG10.7246376811594203No Hit
CTTTTGCTATTTTCCAGGTCTCTGAGTCCATTCTTTGGGTTTGGACAAGT10.7246376811594203No Hit
GTACTTACTCAATGGCGTAATCTGGAATGCCATGTTTTTAAAAAAATTCT10.7246376811594203No Hit
ATGGCCTGAATCCAGGAGGCAGAGCTTGCAGTGAGCGGAGATCGTGCCAC10.7246376811594203No Hit
GTATCAACGCAGAGTACATGGGAAGCCTGCAAAACTGTGAGTCAATTAAA10.7246376811594203No Hit
CTTGAAGGAAATGGAATGGAATGAATTCGAATGGAATGGAATCGCCTCGA10.7246376811594203No Hit
CCTCCAGGCTCATAACTTGTTATTGGGGCCTGTTTTTCCTTACCTAAGAG10.7246376811594203No Hit
ACCGTGGACGGCGTGAAGTTCAAGGTCGGTGCCGAGGCCTTCGCCGGCGC10.7246376811594203No Hit
TGCTGGGGTCCTAAATAAACTTGAAAGGTAATCTAGGGTACAAGGACTAC10.7246376811594203No Hit
ATGGTTTTCAGCTCCATCAGGTCATTTAAGGTCTCTACACTGTTTATTCT10.7246376811594203No Hit
ATATAGTATTGTGACCTCCCACAAACGTGTCACTCATCTTAAACAGCAAC10.7246376811594203No Hit
GGTTTGAGACACTCTTTGTATAGCATGTGGAAATGGATATTTGGAGCGCT10.7246376811594203No Hit
ACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTATAACATCC10.7246376811594203No Hit
TGCTAAGGGTTACAGGATGGAGGGGCAGAAATTATCTGGGTCTTTGGTGA10.7246376811594203No Hit
GAGCAAAACCCTGTCTCGGGGAAAAAAAAGAAAAGAAAAGAAAAGAAGGA10.7246376811594203No Hit
AGAGTGTGCTTGTTCATGTTCCCCCTTTGATGAAGAATACAGCCTCAGAA10.7246376811594203No Hit
GTTAAACTCCATCGTCACAAAGAATTTTCTGAGAGTGCTACCGTCTGGTT10.7246376811594203No Hit
CACTTCCAGTACCCATACAACTATTATGTTTTTGACTGTCACTACAGCAT10.7246376811594203No Hit
CTCTATATGTGACTTGGTGCTTTTCTTTTACTGTTTTTAGAATTCTCTCT10.7246376811594203No Hit
GAATGCGCCCGAGCCGCTGCCGGCCTCGTCGCTGGAGCGCGTGCGGCTCG10.7246376811594203No Hit
GAGTGTTTAAAAACTGCTGTACGAAAGGGAATGGTCAACTCTGTGACTTG10.7246376811594203No Hit
TACGGTAAGAGCGCCGCAGCTTGACACGCCGACGCGTTCGCTACTGCGAT10.7246376811594203No Hit
TTCCCTTCCTTTTCTGAGCTCTAAAAGAGGACACAATCTCATTCTTTGAT10.7246376811594203No Hit
GGCTGCGGACGGTGGCGCGGTCGACCGAAGCGGCCAGAGCGGGGGTAGCG10.7246376811594203No Hit
CCTTGAAGAGGTCCTTCACATCCCTTGTCAGTTGGATTCCTAGGTATTTT10.7246376811594203No Hit
GTAAGAAAGTGTTCTCTAAATCAGCTGTAAGAAGCTCCCAGAAATTTGAA10.7246376811594203No Hit
GGAAATGTTACATTACCTGACTTCAACCTATACTCAAGGCTACAGTAACC10.7246376811594203No Hit
CACAACCTACTCATCTGACAAAGGGCTAATATTCAGAATCTACAATGAAC10.7246376811594203No Hit
CAATGAAACAGTGCTGCTCTCTCACTGGATTGGTAACGCCGAAAGTGAAA10.7246376811594203No Hit
CTTCTGAGCTATACCTTTCCGTGGTTTTCTCTGGTGAGCTAGGTGGGCTG10.7246376811594203No Hit
CCACCGTGCTGAGCAATCCTACTGCATACTGCTGGAGTCCCTCTGCTCAG10.7246376811594203No Hit
ACCCTTAAGGGACAGAAGGAACACATTTTCCTGTGATTTATTTCCTTCTT10.7246376811594203No Hit
TCTTTGATGATTCCATTCCATTCCATTCAATGATTCCATTCGAATCTATT10.7246376811594203No Hit
ACTTTCCCTGGTGTGTGGCATATTCACACTTAGTCTTAGCAGTGTTGCCT10.7246376811594203No Hit
CTCGAATGGAATCATCGAATGGAATGGAATGGAACAGTCAATGAACTCGA10.7246376811594203No Hit
GTTAGCTACCTTCTGATGCCAGCTGACGCGATAATCTGCCGTCCACGCCT10.7246376811594203No Hit
GGTCAACAACGTCGGCATGCGCGTGCAGAACACCACGATCAACAGCGTGA10.7246376811594203No Hit
GTGTTCGACGACGCGGACATCGACGCGGCGGTGGCGGGCGTGGTCGATGC10.7246376811594203No Hit
CTCCAGGTCCTGAAGGAGACAAGAGGTATGCCCTGGAGTCCCAGCTACTC10.7246376811594203No Hit
CCATGATTCCATTCGATAACATTCGATGATGATTCCATTCGACTCCATTT10.7246376811594203No Hit
ATTCCATACCATGATGATTCCATTCGAGTCCATTCAATGGTGATTCCATT10.7246376811594203No Hit
GAATAGAATAGAATGGAATCATCAAACGGAATCGAATGGAATCATCGTCG10.7246376811594203No Hit
TAAATACTGAAAAGACATTTAATTAAATACAGCAGGCATTCTTAATAAAA10.7246376811594203No Hit
CTTACTCCCCTTGACTATAGCAATTGAAATGTTAAAGGAAAACAAAACTT10.7246376811594203No Hit
GTGTTCGACGACGCGGACATCGACGCGGCGGTGGAGGGCGTGGTCGATGC10.7246376811594203No Hit
TGTCACTCCTTTGCTTAACATTCTCCAGTAGCTTCTGGAACCTTTTCAGA10.7246376811594203No Hit
GGTGGTGGCTGGAGGCCCTGGCTGTGAAGAGCCAGCTGGGAGGATCAGCT10.7246376811594203No Hit
GTATCGGGCAAGGCTGTTCCAACGCGATCCGCCAACCGGCACCCTGCAGA10.7246376811594203No Hit
AGCTTGACCCGGGCCAGGCGTGGGCCCTGGAACCGGTGCGCATCGACAAG10.7246376811594203No Hit
GGTGGTGATAGCCCAGGGCGTCGTGCAGCCGCGCGGCCGAGGCGGTGCGG10.7246376811594203No Hit
ATCTAGGACTCTCAAATCTAGAAAGAAGTCAATGCCTGGCTTCAGCACTT10.7246376811594203No Hit
AGCCAAGGCAGGAGGATCGCTTGAGCCCAAGAGTTTCAGACCAGCCTGGG10.7246376811594203No Hit
GTGAGACTCCATCTCAAAAAAAAAACCACAACAAATTTTTTAAAGTGGAT10.7246376811594203No Hit
GGTTTTTGTGCATCCGGTGCCTTGTAAAAATAACTGATTCTCTCAGTCTT10.7246376811594203No Hit
GAATCACTTGAACCCAGAAGGCGGAGGTTGCAGTGAGCTGAGATTGTGGC10.7246376811594203No Hit
GCCTAAACTGTGTCTGCTTTTGTTGGGATACAAGGCCAATTATAAATACA10.7246376811594203No Hit
CATGCACGTGAGCGCCACCGAGGCGGGCCGCGACATCGTGTTCCTGCACG10.7246376811594203No Hit
GTGTCTCAGAGAAATTCAGATGTCATAGATTGTTATTTCTCGATTGTTGA10.7246376811594203No Hit
GCCATCGGCGAAGGTCAGCGTGACGATCGACAGCCCCGTCATGGTCACCG10.7246376811594203No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)