FastQCFastQC Report
Tue 10 May 2022
EGAF00003661874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8956
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT210.2344796784278696No Hit
GTTCTAATGCTTCTTGTTGGCAGCTGCCACCTGTCCGGCGATTCTGTCCA170.1898168825368468No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.12282268870031264No Hit
TTCTTGTACTGAGTCAGGTGGGCATCCTCTCCCTCCAGCAGGCGGCGGTA100.11165698972755694No Hit
CCCCCAGAGGGTGTCTCCATCTTCCCTATTTATTTTCAGCCCTTGAGGGC90.10049129075480126No Hit
GGCCATGAATGTGCCAAAGGTGCCGCCACTCTGCATCATGGTTTTCCCAA90.10049129075480126No Hit
CCTCCCTACCGCTCCAAGCCCAGCCCTCAGCCATGGCATGCCCCCTGGAT90.10049129075480126No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)