FastQCFastQC Report
Tue 10 May 2022
EGAF00003662000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46167
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1090.23609937834383868No Hit
ACCTGGAACTGCTCGTCGCGCTGTCGGAAACGGCCACGATGCGCGGCGCC1040.22526913163081858No Hit
GTACATGGGAGCAGCCGCTGGATGAGTTCCTGCACGCGGCCCTCGCGCAG780.16895184872311392No Hit
GTTGAGCACCGCGCGGGCGTGGAAGACTGCGCCGGCCCCGAGGGCGTTGG710.15378950332488575No Hit
GCGATGTACTGCCCCATGTCGAGGACGCGCACACCTTCGAGCGGAGCCGC590.12779691121363745No Hit
GTACATGGGGGTGCGCGTGTCCGACGTGCGCGGCCGCCAGGTGACGACCA550.11913271384322134No Hit
GTACTGCCCCATGTCGAGGACGCGCACACCTTCGAGCGGAGCCGCGGGGC540.11696666450061732No Hit
GTTCCAGGTGGCGCAACCGCAGCTTGCGCACGAGGTGGTCGGTCTTGCTG520.11263456581540929No Hit
CCCATGGACAGCAAGACCGACCACCTCGTGCGCAAGCTGCGGTTGCGCCA500.10830246713020121No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC490.10613641778759719No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT480.10397036844499317No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)