FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003662225

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662225
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length146
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTTGCTTCAACTTGTTTTTCCAAATTAATGGATCTCTTCCCAGTGTGT419.047619047619047No Hit
CTTATACACATCTCCGAGCCCACGAGACCCTGTTACCCATATCGCGTATG29.523809523809524No Hit
GCTATGGAACTACACGATAAACGCATTATGGACATTCAGAAATCCGACGC29.523809523809524No Hit
TTAATAGGTTGTATTGATGTTGGACGAGTCGGAATCGCAGACCGATACCA14.761904761904762No Hit
GCGCTGGATAAAGGGGATCGACGCACGGCATGTGCCCGGAATCGATCCGC14.761904761904762No Hit
GTATGTGCCCCTGAAATTATGGCATCCAATGATACAATTTTCATCCTTTG14.761904761904762No Hit
CATCTAATGCACTCGAATGGAATAATCATCGAATGTAATCGAATGGACTC14.761904761904762No Hit
GATCCACCTTGGTCAGTGGAAGTCTGTGTGGCTGAGCCCATGCATAGCTT14.761904761904762No Hit
GTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTACATG14.761904761904762No Hit
CAACTGTATGGAATGGAATAGAATGGAATGAAATCAAATGGAATGGACCA14.761904761904762No Hit
CAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA14.761904761904762No Hit
GCTCTTGTCCAAGTCCTAATGACCAACAGACACTGCAGTTTTTATCTTAC14.761904761904762No Hit
CGATTGGAATCATCATCGAATGGACTTGAATTGAATTATCGAATGGATTT14.761904761904762No Hit
ACCTCAGTCTCCAGAGGGTTTTATTCCAATGATCTTCCTTCATCACCCTG14.761904761904762No Hit
GCTTGACGATGCGCACAGTCATGAGCTTCTTGCCGTTGTTGCGGCCGTGC14.761904761904762No Hit
CAACTGTATGGAATGGAATAGAATGGAATGAAATCAAATGGAATGGAATG14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)