FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003662227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length146
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTTCTCACCAAAAGAAATTATGAGTATTGATTTGGCTGATGCTTCGCT313.636363636363635No Hit
CTTTACACATCTCCGAGCCCACGAGACCCTGTTACCCATATCTCGTATGC29.090909090909092No Hit
TAGCTGATGCGCCTTCCAGATCGGCACGGTGCGCAGCTCATCTTCGCGCT29.090909090909092No Hit
GTTTGAAACTAGCCTGGCCAACGTGGCAAAACTCCATCTCTATTAAAAAT29.090909090909092No Hit
CAACCCACGCTGCGCAACACCAAGGGCAGCTCGAACAACGTCGCCATCGC29.090909090909092No Hit
TTTCGGCGCCGTCGGAAAGGCTCATGGAGAGCTCGCCGGTGCCATCGGAG29.090909090909092No Hit
ACGTCGTTGATGCCGATGCGTTCGGTGACGAACTTGTCCAGCGGCAGACG14.545454545454546No Hit
CGCCAGGCTTGACCGGATATTCGTAGTTCGCCTCGGCATAGATCTTCTGC14.545454545454546No Hit
GTTTTTAACTTCTTTGCCATGGGTTTGAACTTCCTCCTTTAGCTTGGAGT14.545454545454546No Hit
GCCTCAGACTGGCTGGTGCAGCATCAGCAAACTGAAGGGAACGAGAGTGA14.545454545454546No Hit
GCGCGGGTGCCGTTGACCTGGCCGAGGTAGGTGACTTGAGTGATGCGGTC14.545454545454546No Hit
CTTATACACATCTCCGAGCCCACGAGACCCTGTTACCCATATCTCGTATG14.545454545454546No Hit
CCACTAATGTTCTCACTTTCCTGCCTCTGTTGTGTTTTTGTTCACCCAGT14.545454545454546No Hit
TTATACACATCTCCGAGCCCACGAGACCCTGTTACCCATATCGCGTATGC14.545454545454546No Hit
GCCTAGAAATCAGAGCTGGCTGCCCCTCCAGACTCCCTAGTGACAGAGGC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)