FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003662233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCCTGAAAAACGAGCGTCGTGTAGGGAGAGTAGACTCTGTCTCTTATA29.523809523809524No Hit
GCTTGTCCACGTAAAGATACGTTTCATCCCGGCGCGAACACTTGAAGACC29.523809523809524No Hit
CACCAGCTTGAAGGAGAAAGAACTAACCCATAGCTACTTGTGATTAAGAA29.523809523809524No Hit
CCTCTGCCTCCCAGGTTCAGGTGATTCTCCCGCCTCAGCCTCCCGAGTAG14.761904761904762No Hit
GGAATCACGGATGCTGCCAATTTTGAGCAGTTTTTGCAAGAGAGGATCAA14.761904761904762No Hit
ATAGTAACCTTAAATACATTCTCACAATCAGATGCCATGTGCTTCAGGCA14.761904761904762No Hit
AACGCGCTGGACGCCATCGACCTGCCCGTGCTCGACCCGCGCCACTGGGC14.761904761904762No Hit
GGCGAGCCCAAAACCAGTGATAGCGAAGGCGATGAGACGCCGCACGGCAG14.761904761904762No Hit
CTTCCGATCTCTGGTACCGACAGAATCTGAGGCAAGCGTCGTGTAGGGAA14.761904761904762No Hit
GGTCTCTAACCAGCTTCTGCTATTTAATTATTGTTGTTATCAAAGACTTT14.761904761904762No Hit
GGAAGGAAGGGAGCAGTCCGATGGCAGCGCCAGTACTCGATCTCGTCCTC14.761904761904762No Hit
GTGTCGTTCGTGCGCGCCGCCATTGTGGCCGCGGCCTGCTTGAGGCCCAG14.761904761904762No Hit
GTCCTTGTCCCGCCTCTGAGTAGCCTGCCTCGCCTTCCTCCTGCCGCTGT14.761904761904762No Hit
CTTAGAGAGAAACCACCCGACTTCAGGTGGGAGACCACCCTCGCAGCCCC14.761904761904762No Hit
GATCAAAGCCCCAGACTAGGAACTTTCTACAAACTACATATAAAAATGCC14.761904761904762No Hit
GTGCAAAGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATG14.761904761904762No Hit
GGTGAGGAGGGGGAGAATTTCGGATCCCAGAATTCAACGACTCTTAGTGC14.761904761904762No Hit
GTAGAATACTGAATAATGTTGGGGACTGTAACAGTATAGAAACCTGTGCA14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)