FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003662234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCTGACGATGCGAAAGCTGCTATGCGAGGTCTTCAAGTGTTCGCGCCG29.523809523809524No Hit
AGTCTACTCTCCCTACACGACGCTCGTTTTTCAGGACCCTGTCTCTTATA29.523809523809524No Hit
TTGTCCAAGCTTGCAACATTTCGGCATTTTCAAAGGCATATGCACCTGCA29.523809523809524No Hit
GCGCTGGCGCGCCGCCGCGACGAGGACGATGAGGACGCGAGCCCGCCGGA14.761904761904762No Hit
GGCCAGGTATGGTGGCTCACACCTGTAATCCCAGTGCTTCGTTATGCCAA14.761904761904762No Hit
CCTGCAGTCTGCATGGGACTGGCAGCCTTGTGGTACCGACGCCATCCGGC14.761904761904762No Hit
CCAAAGAAGGGCGCAAGAGGCGGCAATTGTCGCGCAAGCTGCGGGGCCCA14.761904761904762No Hit
CATGTGTCACTTAACAACTGGGATATGTTCTGAGAAATGTGTCGTTAGGC14.761904761904762No Hit
GGTCACGACTGCTGGACTTCCCAGTTAAATGTGTCAATTGCTTAATTTAA14.761904761904762No Hit
GGTGGGTGGCATTGACGGGCACCAGGACCAGTTCACGCCAGGAAAGCTTG14.761904761904762No Hit
GCTTTATCATGTTATGCAGAAATACAGCAGTTAGGAATGAAACCTCATTG14.761904761904762No Hit
GTCTTGAACTCCTGACCTCAGGTGATCCGCCCACCTCAACCTCCCAAAGT14.761904761904762No Hit
GCACAACAATTTGAAAGCGACCGAATGGATGGGCGTTAGACGAGAACTGG14.761904761904762No Hit
CCAGCTTAGCTCTCAGCTGGGCTGAGCATGCCCTAACTCAAGCGTGCCCT14.761904761904762No Hit
GTTTCTGCCTAATGAGGGAGACAATCCAATAATCATGAAAAGGGGAAAGG14.761904761904762No Hit
GATCTACACTTTTCCCTACACGACGCTTGCCTCAGATTCTGTCGGTACCA14.761904761904762No Hit
ATCTTGCTCTTGCTCCTTTTGATGGTCACCACCCCTCCACCAAGCTTCCC14.761904761904762No Hit
GTTTATTGCGTCATTGGGTTTTTTACATGAAACTACCCAAGTTGCAAATA14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)