FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003662393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length146
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGTCGGCGGCTGCGTCGGGCGTCGCGGCCGGCAGGTGGCGCAGGCAGTA318.75No Hit
ACCGTGTCCAGCTCGCGCCGCTGCTCGACAGCCTGTGCAACACCTTGGCC212.5No Hit
GCCCTGTATGCTATACCCGGTGCACTTGCGGCAGCGTGGGCCGAACACCC212.5No Hit
GCTTCTTTCTGCTCAAAGACAGCATCGAGGCGACTGCGAACAGACTGAAG212.5No Hit
CGCCAGGGAGATGCCCACGATTTGCGCGCGCATCTCGTCGAGCGAGGTGG16.25No Hit
GGGTAATACTGGATCCGCCACACCGAGCAGACGCATGGCGCGAACGACGC16.25No Hit
GGCCGTGTCCCCGACCGTCCCCTTGGACGGCAGCCCCGTACCCCTCGTCG16.25No Hit
GCCCGGGGGCTTGCCGCCTTGTACTATGTCAATGCTACCTGCAGTCGGAC16.25No Hit
GAGTACCGCGCCATCAGCCCGAAGGCGCTGGTGACCATCGTGGCCGGCCT16.25No Hit
GAATGGGGATCACCGCCAGCACACCGTAAATGAGCTGATATGACGGGAAC16.25No Hit
GGGCATGACACCCCCTCTAGATCAGGCTTTGCACCTCATTCGAGCACTTT16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)