FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003662577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length146
%GC68

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGTAGATGCCTGCCCGCAGACGCCGCCAGCGGCCGGATCGCACGCGACG312.0No Hit
CCTGACCTTTTAGGCAGCATTTCTGTGCCCTTCTCACATTGATGCTCACA28.0No Hit
GGTACATGGCGGCGTACACGTCCTTCATGCCGAGCTGGAAGTCGATGTAC28.0No Hit
CTACCGGGTCGTGCAGGAAGGGCTCACCAACGTCCGCAAGCACGCCGCCG28.0No Hit
GTCCTGGCGGAGGACGCCGCCGACCGTGGCGAGTGGGTGCTGTCGTACGC28.0No Hit
CCAGTGCGATGCACCAAAGTAAGGTGTGCCACACTGCAGCTCATTGGGTC14.0No Hit
GTTCCGACCACATTCCGGACAAGCCGCGCATCTACGCCTCTAAGGTGAAA14.0No Hit
GCCGTGGTCGACGGGGTCCGCAGCCCTTCGTGCTCGGCAGCGAACCGCAG14.0No Hit
GCAGCAGCGTGTGCTGCACGGTGGCGTCGGCGGGCACGGCCAGGGTGACG14.0No Hit
GTCTGCAATATCTGCTGGCCGCGACAATCCTCGCCGGGCTGCTGCAGCTG14.0No Hit
ACCAGACGGACGTCGCCGGGTTCGCGACCCGCTACCACCTGACCGCCTGT14.0No Hit
CGACCTGCTCGCCGCCCTCCTCGAGCCAGCGGTCGAGCTGCTCGTAGCTG14.0No Hit
ACCACGACGAGGGCCAGCACCGGAGCGGGTGAGAAGCCGCGTCCCGTCGA14.0No Hit
CGTCCGCCACGTCCGGGTCCAGCACCGCCAGGACCGAGCGCACCGCACTG14.0No Hit
GCGCAGGCGCGCACCGCGGCGCAGGCCGCCGACCTGCTGGGCGTCGAGGT14.0No Hit
GTCCGCGGTAGTGCTGAACGTCACCGCGGTCAACGCGGCGACCGGCACCA14.0No Hit
ACCCAGAGCACCGACCTCGCCCCCGTGGGCCCGCTGGAGGACTGTCTCTT14.0No Hit
GGGCCTGACCTTCTTCAGCGCGAACTACCTGTTCCAGCGGGTGTTCTACG14.0No Hit
CTGGTCGGCGGTGCAGGACGTGCCGGCGCTGGTGGCGTTCGGGACCGACG14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)