FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003662578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length146
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACAGCCCCTGTCCGCGCCGGCGCCCTCCACAGGTTGCCCGGGATGGTG312.0No Hit
ATTGCATGGTCACATTTGAGCCACTGCCCAGGGCTTAGACACTACCCAGG28.0No Hit
GTACTACTCTCGAGCTGGAGGACTGACCGATGGACCGTTGGGGACTGTCG28.0No Hit
GGCGCGGATCGCCCGCAGCACCCCCTGGTTGGGCACGTGGTCGAACGGCA28.0No Hit
TCCTCCAGCGGGCCCACGGGGGCGAGGTCGGTGCTCTGGGTCTGTCTCTT14.0No Hit
GGCCCGCACCTCGCCGTCGTTGAAGTTCACGTTCGACGTGGCCGGCTCCG14.0No Hit
CGTCGGTGGGTGCGGCGAGGACCGGGCGGGGGTTGCGGACGTCCACCGTC14.0No Hit
CGTCCCCGAGGGTGCGACCCGGGTGCTGGCGGCATGGGTGGCGCACCTGC14.0No Hit
GCGGTCAGGTGGTAGCGGGTCGCGAACCCGGCGACGTCCGTCTGGTCTGT14.0No Hit
CCACAGGGACAGCATGTTCCCGACCACCATCACGGCCAGGTTGGGCAGCT14.0No Hit
GCTCGGCCGCGGGACCGCTGTCGAGCAGTTCCGGGCCGAGCAGGTGGTGT14.0No Hit
ATGTTCGCCGGCGGCTTCCGGGACCTCGCCGACCAGTCGGTGGAGGGGTT14.0No Hit
CGTCGGTGGGTGCGGCGAGGACCGGGCTGGGGTTGCGGACGTCCACCGTC14.0No Hit
CACCCGCACGCCCTTGCCGTCGTACCCGCCGCGGGGGGTCTTGAGGACCA14.0No Hit
GGTTTACCGGCGAGACCGGGGTAGCGTCAATAGTCACCGAAAGGGTTTCG14.0No Hit
GTGATTATTCATCCTCTCCAGAGCAACCTCCTGCAAAGTCACTGTGCAGA14.0No Hit
CCGATTTGGAGACGAAGCGCATGACGCGGTGCATGTTGAGCCAGCCGGCG14.0No Hit
GGGGCGACCCCGCCGATCACGAAGCCGGTGCGGGAGCGGACGAACTCCGG14.0No Hit
GCACATCCGATGGGCATACCTCCGCGGTGACGAGTGGATCGAGTTCGCCC14.0No Hit
TCGGGGAGGACTTCGTCCGGCTGGTCGACCCGATCCGGCACCCGCAGGGA14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)