FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003662579

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662579
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length146
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGCAACCTTCCCCGGACTGGCGTCTCGACTTCGTCCAACATTTTTCG28.695652173913043No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAGGTGCTACTCATCTCGTA28.695652173913043No Hit
AAGTTGGTCCAGTAATTCGCTGGCAGGCGTAGTGGAAGCGCCATAACCAA14.3478260869565215No Hit
GACGGACGGCGTCGGCGAACGTCAACCGCTGCGGACCGGCCACGTCGGGG14.3478260869565215No Hit
AGTCCGTTCCGCGGGTCGGCCGGGCGGGGCGGTCAGTCCTCGGTGCGCCC14.3478260869565215No Hit
GACGACGGCCTCGTCGGCGGCGACGTCCTCGAGCTGGCGGGCGCCGGCGA14.3478260869565215No Hit
GCCAAAGTTATCGTTAATGCGTTTGAAATGATCCAGGTCCAGCAGCATTA14.3478260869565215No Hit
GGTCCTGTCCGAGTTCTTCGCGACCCGGCGCGGCCTCGGCCGGGTCGTGC14.3478260869565215No Hit
GGCGCGGATCGAGCACCTGCTCCAGCGGTACGGGTCGCTCACGCACGACG14.3478260869565215No Hit
GCGTCGGCTTCAGGAAGCCGATCATCTGACGATCGACGTAGTTGATGACC14.3478260869565215No Hit
ACCGGTGGGCGCGTCCGCTGAGGTCCGACGGCTCGGCGGCGCAGCCGGCC14.3478260869565215No Hit
ACCGCGCGCCGGGCGTGCACGTCGGCCAGGGGCTCCACACCGGGCACCAG14.3478260869565215No Hit
CTGGCGCACCTGCACGAGGTGTGGTCCGCGCAGCCCGTGGTGGCGCCTGT14.3478260869565215No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAGGTGCTACTCATCGCGTA14.3478260869565215No Hit
GGGTACTCCTCACGGATCCCCTTGCCCGTCATGCCGTCGAAGGCGCCGAG14.3478260869565215No Hit
CAGCACCGGGACCCCGTGTGCCTCGAACAGCTCTCGGGCCTGGTACTCGA14.3478260869565215No Hit
GGTGTCGGGTGTGATTTCTTTGCGGCGACTCGAGACGGCCGCTTCATCGA14.3478260869565215No Hit
TCACGGAACCCTGTCGGCGGACGACCTGGCGGACCTGCTGACCGGTGCGG14.3478260869565215No Hit
CCTTTCTCCTACGACCTCGTCTTGCCTCGGGAATCGCTTCAGCACCGCCT14.3478260869565215No Hit
CGAGAAGGTCAGTGACCAGCGGATCCGGAAGGTGATGGGCGCGCAGGTCT14.3478260869565215No Hit
ACTCAAGGAAAAGCCGCGATGAATAGCAATGCCGATCCGCTCGATGCTGT14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)