FastQCFastQC Report
Tue 10 May 2022
EGAF00003662614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6380
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCTAGACTGATACCTCCTCATGAAATTTCTGCAGACGTCGCGCCATCG130.20376175548589343No Hit
AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACC90.14106583072100312No Hit
CTCCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCG80.12539184952978058No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA80.12539184952978058No Hit
CCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGT70.109717868338558No Hit
CTCCTGCTCCTTGCAGCCATGCTCCTGGGCAACCCAGGTCTGGTCTTCTC70.109717868338558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)