FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003662692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003662692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4129
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTCTACATCCCCAGAACTTCTGATTCATAAGCCTGGTGTTGCTGAAT70.16953257447323808No Hit
GTCCAAGCGAGGGGGTGTCCGTAAAGGGGCAGGGGACGTTCAGAAGGCGT70.16953257447323808No Hit
GTGTGGCCTGATGGGGGGACTAGGTCACAGTGAACTCCCCACACGCCTGT60.1453136352627755No Hit
CCCAGGCTCTGGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCATCATG60.1453136352627755No Hit
GTCTGCCCTCTGACTGAGCTCTGCAGATCCCCTTCAGAGCGGTGGAGCTG60.1453136352627755No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGA60.1453136352627755No Hit
GCTGTAAGGTCTGCGCCAAGCAGCTCAACGAGGACTGCAGCAAAACGCAG60.1453136352627755No Hit
AGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGG60.1453136352627755No Hit
GGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT60.1453136352627755No Hit
CCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGG50.1210946960523129No Hit
TGTTTAACCAGAACCAAGGTGTTCACCCCCCACAGAATGTACATGAAACA50.1210946960523129No Hit
GGGTGCATCATGTAACTGGCATGTGGGTGTACCCTTTCCTGGAACACATT50.1210946960523129No Hit
CCTCTGAAGAGTTACATGCTCCAAGACTCCCTGGAGCACGTGCAGCTGTT50.1210946960523129No Hit
GCCCAGTCCCATGTCCCGCCATCCCTCACCATTGTCGAGGGTGACCAGGA50.1210946960523129No Hit
CGATGGGGATGGTGGGCTGGGAAGACGGCTCCCATCTCAGGGTGAGGGGC50.1210946960523129No Hit
GCGCAATACGAATGCCCCCGGCCGTCCCTCTTAATCATGGCCTCAGTTCC50.1210946960523129No Hit
CTGCCCTCCTGCCTGCAGCCATGACGCCCCTGCTCACCCTGATCCTGGTG50.1210946960523129No Hit
CCCGAGAGGAAGCCGGGAATGCGCACGCGCTCTTCCACGTGCTCCTGGTC50.1210946960523129No Hit
GACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAA50.1210946960523129No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT50.1210946960523129No Hit
GAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTC50.1210946960523129No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)