FastQCFastQC Report
Fri 10 May 2024
EGAF00003664031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003664031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Total Bases1.1 kbp
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCACAGCTGTGCTGGAAGTGTGGGGAGAACCCGGACAGCTCAGTCCTG218.181818181818183No Hit
TCCCTCTCCTGTATCTTCAGATCAGCGTGGAGCTCGGCCAGCCTCACGGG218.181818181818183No Hit
GCTGCAGGGTGGGGAATTTAGCATGGATCTTCGTACCAAGAGCACCGGTG19.090909090909092No Hit
GCTCCCATCTCAGGGTGAGGGGCTCTGGCAGCCCCTCGTGCTGCACATGG19.090909090909092No Hit
GCTGGGGCACAGCTCCGCCTCTCCTCCAGCCCCTCGGTCCCATGAGGCCA19.090909090909092No Hit
ATAGTGACCTGGGTACACCAATCGGAATATTGAATTTGGGGAAGTCAAGG19.090909090909092No Hit
CTGCTTTGTCATGCCATTAAGCTCACAATAAGGAAGAAATAACAGATAAG19.090909090909092No Hit
GGTGTCTGGGCTCCTGGAGGCTCCTGAGTAGCTGGGATTACAGGCGTGAG19.090909090909092No Hit
GGTCAACGATCCCTCCCTTACCATCAAATCAATTGGCCACCAATGGTACT19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)