FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003664095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003664095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87
Sequences flagged as poor quality0
Sequence length100
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTTCGACAACATGGGGCTCAGCACCCTCGTGGCCGCCGTGCCCGTGG44.597701149425287No Hit
GCCTCGCGGGGACCGAGGCGGGAACTGTGGCGGGATGGTGGCGGCGACGG33.4482758620689653No Hit
CCCAGGGCTCCGTGCGGCTGGAGAGAGTCCGAACCTCCATCCGGAGCGCA33.4482758620689653No Hit
GGTACCGCATCACGGCCACCAACGGCACGGCACCGGTCTCGTCGACGACC33.4482758620689653No Hit
GTCATGGTGACGGCCCAGCTGCCGCCCTTCGCCCAGCCCGGCCAGGAGCT33.4482758620689653No Hit
ACAGCGCGCACGTCGGGCCCTGACACACGTACCACGCCGATGCCTCCCCG22.2988505747126435No Hit
CACTACCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTA22.2988505747126435No Hit
GCCCGAGGCGGTCGCGCTGGAGGCGGCGGACGCCTCGGCCGAGGGCGCCT22.2988505747126435No Hit
AAGGAAGAGCAAGCGCGTGCTGTGGGCCACCTGATCGCTGACGTGCTAGA22.2988505747126435No Hit
GGTCGGTATCATCGAAGCGGATGTTGCCGCCGGTGGGTTTCATCAACCCC22.2988505747126435No Hit
GTCCGAGCGTGCTCGCCCTCAGATCAGCTTTGAATTCCGTAGTCCAATAG22.2988505747126435No Hit
CGCCCGGTAGGCGTGATCGACGACGACCGTCGTGCAGCTGCCGCCGCCGG22.2988505747126435No Hit
GGACTAGAGACCTCGGGTGCAGAGCTACTCTCAACCACCCGGCGAATAAC22.2988505747126435No Hit
ACTCGGCTGCCTGCGTTGGCATGAAGTCTTGTGCCGCCTTCACCAGCCAT22.2988505747126435No Hit
TTTGAGGACGGTGAGGACGCGGCGCTGCCCGCCGTGGTTGCGCTGGCGGC22.2988505747126435No Hit
CGATATAAGTGCGTTTCAAACTGATCGATTGACTCTTTCCCGCCTTCAGA22.2988505747126435No Hit
GTGCCTGGGCGCGCACCTCCAGCCGGCCCAGGCGCCGGCCGCGCAGCTCG22.2988505747126435No Hit
CAACAACGCCGTTGGCGGCGGCACAGCCGGCAACCCCGACCTCAAGCCCA22.2988505747126435No Hit
GGCTGGATCATCGTGGCAGTCGGCAACGACGGGCAGTTCCGGCGCGTTGT11.1494252873563218No Hit
GAACTACCCCGTCACCGTCAACGACCCGGCGCTGACCGAGCAGATGCTGC11.1494252873563218No Hit
GGATGTACTGGTAGTTGAAGAAGGCGAAGGTCTCGGTGTCGAGCGCGAAG11.1494252873563218No Hit
GCAGCAGGCCCAGCGAGGCCATCAGCGCGAGCAGGGCTCCGTCAGCAAGC11.1494252873563218No Hit
GAAAGTCGCCGGCGCGCACGAAGCTGGCCACGCTGGCGGCGATCAGCAAG11.1494252873563218No Hit
CCCTGGAAGTGCGCATCGACCCCGAGTTCGCCGCGCCGACCACCGTGTCG11.1494252873563218No Hit
GCCATCGCATCCGGCAGCTGGAGTCGCAGCTGGGCTTCAAGCTTTTCGGG11.1494252873563218No Hit
CGCCATGAAGGTGGTGATGCCAGCCACGACCTCGCGCTTTTGCGTGCTGC11.1494252873563218No Hit
TCTCTGAGAGACGACGATCATGCCTGCAACCAAAACGCGCAACTACGGTC11.1494252873563218No Hit
CTACTGATTATGATGGTGATCCCGCTACTGCGATAGTGGCGCCTTATTCC11.1494252873563218No Hit
GTCTTGGATGCGGCTTTGGGGGGGGGGGGCCGGGCGGGGGGGGGGGGGCG11.1494252873563218No Hit
ATGTTGTTTGACCGGGTCAAGGTCGATGGTTGTGCACCCACGAGCAGCGC11.1494252873563218No Hit
AGGGAGAGGGACGCGGCAAAAACGTCTCGCATCGAAACGCTGTGTTGCGA11.1494252873563218No Hit
GTGCACATGGCCGCCTGGGTGGGCGCGGCACGCACGCTGGTCGCGCTGAA11.1494252873563218No Hit
CAGTTGTGCTGCTTATCCAGCTCCCCCTGGAGCCGCTCCAGTTTGGCCGT11.1494252873563218No Hit
GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCA11.1494252873563218No Hit
GTCCCGGAGAATTTGAATGATGCATGCGATAGACGACATCGAGCGCATCA11.1494252873563218No Hit
CGAGTACGCGGTGGCCGCATTCGAGCGCGCCGCTGTGGACTACGTGCTCA11.1494252873563218No Hit
TCTACGGCTTCTGGGGCATCGTGCTGGGCGAGGTGTTTTATACCTTTCCG11.1494252873563218No Hit
GGTGGGTCGTGCTGCGGCCGCGCTTGCGCGACACCGCCGGCTATGCGCGA11.1494252873563218No Hit
CCGCCACCGTCTGCCCTTGCGAGAAGGGCGCGGGCTGGCTCACCACCGGG11.1494252873563218No Hit
CGTCGGCGCTATCGTCAAGCCTTGGCGCGTCTGCAGCAAGGAAGACGATC11.1494252873563218No Hit
ACCATGACTGCTCTCGACGCAATGGCCTACGAGGTGCCTCTGTCCCAGCT11.1494252873563218No Hit
CCATTCTGGACATCGACGAATTCAAAGCCGTCAACGACGCTTTTGGCCAT11.1494252873563218No Hit
GAACAGGCAATTCGTCAGGCATAAAAAACGCGGCGAATTGCCTGCTGCGC11.1494252873563218No Hit
CGTCGATTGGTCGGGGCCGTACCTGGCCGGGCAGGCCAGCGGGGGCGCTG11.1494252873563218No Hit
ATATGGATGCCGCTACTGGTCCGGATGGGCGAGCACAGCGACGGAACCGG11.1494252873563218No Hit
CCCTCACCACTGGCGTGGTTCTTCTTCGCTGGCAACTTCTTAGTGCCGTA11.1494252873563218No Hit
AGCGTGAATATGTGCGCATCTATCATGCATCCCCGGTCGCAACCCTGCTA11.1494252873563218No Hit
GTAGCTGTGTGGCGTGCCGGAGACGCGCTGCGCGTTGCCGGCGCTGCTGT11.1494252873563218No Hit
GTGCCTCACGATCCAGAGATGACCGCATTTCAAGCCTCGCATCCACTACC11.1494252873563218No Hit
GTTGGGACCAGTGCGCCCATCCGCCCCGCCGGTGAACCTCGCGCGAAGGG11.1494252873563218No Hit
CGCCATGAAGGTGGTGATGCCAGCCACGACCTCGCGCTTTTGTGTGCTGC11.1494252873563218No Hit
GGAGGTACGGGTACCGGACGTCGTGGGGCTGAGCGCGTAGATGGTTAGGC11.1494252873563218No Hit
GCGATGAGGTCTTGCTATGTTCCCCAGGCTGGTCTTGAACTCCTAGGTTC11.1494252873563218No Hit
AGCGCCCGATCCTGCTGACGTTCGATGACGGCTATGAAAGCCACTACACG11.1494252873563218No Hit
GAGCAGAAATGGGAAAACAATGCAGCAGAAATGCTTCTACCCATTGAGGA11.1494252873563218No Hit
GTATATGTTCCACACCAGGATCCGAATACGCTCTTCGGTACTTAACGGTT11.1494252873563218No Hit
CCTCAGTGGTGGGCCGGTATCGCAGGCCCCACCAGCCGAGCTCGGCGAGC11.1494252873563218No Hit
GTCGAGGCCATTCCGCGCGGGCAGTGGGAAGCGTCTTCCAGCCTGGCGAT11.1494252873563218No Hit
CGCACAAGCGTCGTATTTCCGCCCTGGGCCCGGGCGGTCTGACGCGCGAG11.1494252873563218No Hit
ACCAGATACCGTACGCATTATGCTCAGTCCTCATTTTGCTCGGCAGTTCG11.1494252873563218No Hit
CTTCCGTGGATGTCAAGACCAGGTAAGGTTCTTCGCGTTGCATCGAATTA11.1494252873563218No Hit
GTGCGCCGCGTGCCGACACGGGCGTTGCCGGTGCCCTTTTGCCGGAAGAG11.1494252873563218No Hit
GGATACTTGCGCTCAGCCGGCAAGCCGAAATCATTCTTAGGCAGAGCGTT11.1494252873563218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)