FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003664175

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003664175
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC72

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGCGGATAGAGGAAATGGCATCGAGCGTCGCTCTCTCACGGACTATGC211.11111111111111No Hit
CCTGCGCGCCGGAGAGCTCACGCCGGTGAGGGTCCCCGATCCGGCCGACG211.11111111111111No Hit
GCGGTCGCGACGCCGCGCCCCACGCGCACGGCGACCTCGTTGCCGGCGAC211.11111111111111No Hit
TCGCAGCTCGGCGAGCGCCGCCGCGCGGCGACGGATCATCTCCGTCTGCG211.11111111111111No Hit
CGTGAGGCCGCCGGCGCCGAGCGCTGACAGGCGGCGGCGGTGCGTGAGGC15.555555555555555No Hit
GCGATCTCCTGCGCGATGAAGGCGGCGACGTCGTTGGGGTACGTGCCCTT15.555555555555555No Hit
AAGGTCGGCTGTCTCGGGATCACCGAGCCGGGCGCCGGCTCCGACGTAGC15.555555555555555No Hit
GGCGTGTTTGGCTGGGTGAACGCCACCAACGACGGCGTTTCGCAAATGAT15.555555555555555No Hit
GTTGATAGCGAATTTCGCTGCTTTACCTTTCAGGTTTTCTGCGTGGTATT15.555555555555555No Hit
GGTCACCGCTCGCGAACGTAGGCGCGGTGGCCGGCGCGCTCGCGGTCACG15.555555555555555No Hit
ATCTGGATGCGCGACGAGCCCGGCGCGGAGCGTCCGTCGGAGAACCGCAT15.555555555555555No Hit
CGGTACCCTCTTCGAGCCCATGCGCCACCAACGCAACCGCTACCAGCTCT15.555555555555555No Hit
TTCCGGGCGCGGCTCAGCCGCAGGTCGCCGCGCGGTAGCGCGATCGCCCC15.555555555555555No Hit
ACGCGGTCGACCGCGGGCAACGCCCGCCGGCACCCGACCGCAGCCTGCCG15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)