FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003664176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003664176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCAGGCCCGGCCGGACTCGTAGACCAGGCCGTGGCGCAGAAGGAGCTT211.11111111111111No Hit
ACCCAGGCCCGCGTCCTCGCGAAGGCGTCCGCGGAGCTGATGGAGGAGAT211.11111111111111No Hit
CGCTCGGCGTCGGCATCGCCGCGCGTGCGCTGGAGGAGGGCCTCGCGGCC211.11111111111111No Hit
AGGAAGCGCCGCTGCCGTGATCGCAACCACGCGCTTGAGACAATGCCAAC211.11111111111111No Hit
GAGGACGCGGACACGATCACGCCGCAGACGATCGTCAACATCCGCCCGGT15.555555555555555No Hit
GAACAGGAGCAGCGAGAAGAACAGCAACAGCGGGATCGCGCGCGCGAGCA15.555555555555555No Hit
GAGCCACACTATCCCGAACTCGCTGCCGTCGGCGAGGCAGCGCTCCATCA15.555555555555555No Hit
GCTCCTTGAGCGCCAGGCGCTGCGAGCTGCCCGTCGTCTTGATCGCGTCC15.555555555555555No Hit
GCGCATGCAGATCGCCCCGCTTCGCGAGCGTGATCAGCTTCTCCAGCTCG15.555555555555555No Hit
CTACCAGCCCGATCGAGCAACGGCGCCTGGTCGCGGCACGGCGCGCACCA15.555555555555555No Hit
GCTCATCGCGCAGGTCGAAACGCGCCATCGGTCCAATATAATTCTGCTCA15.555555555555555No Hit
CAGGTGCCGAACACGGCGCTGCTGGCGAAGGCGTTCGAGCTGGAGGCCGA15.555555555555555No Hit
TGAAGAGGGTGATCCCGGCGTGGCGCTCCTCCGGGTCGGTCTTCGCGACA15.555555555555555No Hit
AGTTTATCCGGAAGTTGAACTGCAGGGTCTGGAAGCGATCGAAGTTGAAA15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)