FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003664315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003664315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCCTAACTGGTAACACTCTCCGCGCCCGATTTGGCCGCCCTTCTTTGC24.545454545454546No Hit
GCGTCGAGTTGACTGGCCTCGACGCGCAGGTCGATCGCTCTGCAGCCGCG24.545454545454546No Hit
GTCTTGTCATCTGCCATGACTCCAGCGTGCGTGGCCGCATCGGCCTGCAA24.545454545454546No Hit
CTTATACACATCTCCGAGCCCACGAGACTACCCTAATACGATCTCGTATG24.545454545454546No Hit
GCGCGGTGCACGTGCCACCTCGTCCACACACTTATCCACACCGCCCTCGG24.545454545454546No Hit
AGATGATTCCGCCATGCGCACCACGCTGCAGCGCACCCTGATGCGCCGCG12.272727272727273No Hit
AGCCCGTTCGGTTGCGGGTGTCTCTGGCCCTGCGGTCAGCCCTGGGAACG12.272727272727273No Hit
CTGCTTGCCCTGTGCGCCGCGCTGTCGATCTCGGCAGCGATCACCATTTC12.272727272727273No Hit
GAGTCCGGGTGCATGAATTTGACTGGCGGCGTGGCGTGCTTTGTCTCTGT12.272727272727273No Hit
GTGCTGGAAAGCCACGATATTAGTCAAACTGACTTGGCAGAGGTGCTAGG12.272727272727273No Hit
GTACGCAAGCGTATCACGCCGGCCTCCGGCAATCGGCTTCGGCTGCGCAA12.272727272727273No Hit
ACCTTGACGCTCCACTCGTTTGGCGGCGGCAGCTCGTGCGCGAGCTGCCC12.272727272727273No Hit
AGGCGGGTCGCATGCGTGGCCTCGCCGAGGTCGAGCGCGCGAAGCTGGAC12.272727272727273No Hit
GAGGGGCTTACTGCTACTCAGATCGCGGAAACCCTTGGGGGCGTGACAAG12.272727272727273No Hit
ACCAAAGCGCGCTTGTTGACCAACATATAACCCCGGCTGGTTATGAACAG12.272727272727273No Hit
CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGT12.272727272727273No Hit
CTTATGCACATCTCCGAGCCCACGAGACTACCCTAATACGATCGCGTTTG12.272727272727273No Hit
GTGCTCGTCGCCTGCCGAAGCAAAGCGCACAAGACACTCCCTGTCTCTTA12.272727272727273No Hit
CTGTGGATGTTGGCCATTACCCATTTAGGGCCGAATCGAACCAGTATTTT12.272727272727273No Hit
CGACATGACGGTCGCGCCATAGCGCCACCGCCGCTTCCCAGAACTCAGCC12.272727272727273No Hit
CGCCCTTCTCGATCTCGAGATCGACTGCGTCGAGTGCCGCACGCTTCTGC12.272727272727273No Hit
TGATGGTATCAACGATGCCTTATTTAAAATGGATCAGCAAAAACTGACCC12.272727272727273No Hit
GCGCGTAAGTCGCTTGTCCGTGGCTTCTCTGAGAAGAAAAGTTGAAAAAG12.272727272727273No Hit
GGCCGCGACTTCGTCGATTTCGACGAGGATCTTCAGGTCAAGGATCTGCA12.272727272727273No Hit
TCGCCGCCTATCCGCCCAATTCGCTGCTGCCGCTGGTCGGCGCGCAGCTT12.272727272727273No Hit
GTGCCGGGAAGGAATTCACGCGTTCAGCCCGCCGTTCACGCTGATCACCT12.272727272727273No Hit
CCGCAACTTCGCCAAGGCGCGTGATGAAGCACGCAAGGGCCGGCCATGAT12.272727272727273No Hit
GTCATCGACCTTGTAGACCGCGCCGAGCTTCCAGTTGAGCAGGGTGTCCG12.272727272727273No Hit
AAGGTGTACCGTGAGGAGTGCTGGAACGCATAGAAGTGAGAATGCCGGTA12.272727272727273No Hit
GTTCCTGGTGATGCTCTCGGGCGAAGCTGTGCTGGTCGAGGACGAAGGCC12.272727272727273No Hit
CTCTTAATCATGGCCTCAGTTCCGAAATCCAACAAAATAGAACCGCGGTC12.272727272727273No Hit
CCTGCAAGGACGTCCCGCTGATGATGGCCACCCCGCACACCCTCGTCGAG12.272727272727273No Hit
ATGATGATCATATTGAGGATCGGTTGGTTTTTGCGGTAATCCTGTCTCTT12.272727272727273No Hit
GGGGTGTTCTCGGCCGCCAGCGGCGAATTCTCGACCGCGCTCGGGCGGCG12.272727272727273No Hit
GCTCTGGCCGCGCGACCCGCCGGTGCGCTTCCGCAAGACCGTGCCCGACT12.272727272727273No Hit
AAATGGGGTCGCTAAATGTCCCCTAAGGTTGCGGGCAAACGCAAAACTGC12.272727272727273No Hit
GGATACCTACCACTACCTGCCCTTCAGCCTGCCCCACCGGAGGCCTCACT12.272727272727273No Hit
CGGCTGGTCAACGCGGTGGGCGAGACGCGCATCCGCGGCGCCGAGGCCCT12.272727272727273No Hit
CCGCGAGGTTGGGCAGCGCGTGGATCTCGAGCTCGAGCCTCGCGGCCTCC12.272727272727273No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)