FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003664316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003664316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36.8181818181818175No Hit
CGTGAAGCGCGGCTGCGTATCGCCGCCTTCGAGGACGACGGCGATGCTGC24.545454545454546No Hit
GCAGAAGGAGGAACGGTCACAACGAGCCAGCCTAACCGCTCTTCGTCGAC24.545454545454546No Hit
GTCTCCGGAGGCGGCCATGGCGGCGGACGCCTATCGGCTGATCTCCGGTC24.545454545454546No Hit
CGGGCCCGGCATCGGCGCCGAGCGGGCCCAGCCAGCCGACGATCTCGGCC24.545454545454546No Hit
ATTCACTGCGGCTGACGTAAAGTCAGCACCCCTTCTCCCGAAGTTACGGG12.272727272727273No Hit
AGGTTTGCTCAATGGTGGTAAAGCCCCATTTTGCTTCATCGACAGGGGTT12.272727272727273No Hit
GGCGGCCGGCTTTTTGGGACTGGCGCTGCCGCGCCGGGAAACGCTGGCTG12.272727272727273No Hit
CTCTTCCCACTGCCTCGGAACCGCAATAGCGATGTCTGTTGGAGAGAGAA12.272727272727273No Hit
ACATGACAAAAGGTGCACTCATCCTCAGCCTTTCATTTTTGCTTGCCGCA12.272727272727273No Hit
GTGCGCCGGCCGCTGGCCGCATCGGGTTCGGAGGCATGGACATGGACGTA12.272727272727273No Hit
CCACATCCACATGCAGCCCGCGGCGCATCAGGGTGCGCTGCAGCGTGGTG12.272727272727273No Hit
GGAGTGTCTTGTGCGCTTTGCTTCGGCAGGCGACGAGCACCTGTCTCTTA12.272727272727273No Hit
ACATGGTCCAGCGTGTCATTGAGGTAGACCTTGGTTTCCGCTGTCATGAA12.272727272727273No Hit
CTGGACAAGCGTAGCGCGGCCAACCTTCACCGTGTCGAGGTCGCCAGACT12.272727272727273No Hit
AGGTGGCGTTTTTAATGATGTTTTACGCTGTGCAAGTAAAATACCACAGA12.272727272727273No Hit
CGCTTGAACATTCGGACACCCTGCTCAACTGGAAGCTCGGCGCGGTCTAC12.272727272727273No Hit
CGATGGCGAAGTTGCCGACCGCGAGCGACGCCGCGCCGCTCGCCGAAGCG12.272727272727273No Hit
ACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGG12.272727272727273No Hit
CGTCACGGCCGCGAAGGGGCGGAAACCGGCAAGCAGCAGGCCGCGCAGCC12.272727272727273No Hit
GCTCCGTACGCCGCCGCTGACCACGACGAAGCAGCAGTCGGCCTGGCTCT12.272727272727273No Hit
GTTCGTCGCGTCGGCGACGATCCGAGCCGCCGCATACGCCGAATGCCGGC12.272727272727273No Hit
GCTTAGCCTGGGAGGGGTTGTTGGTGGAACAGTCCACAGACAAGATCTCC12.272727272727273No Hit
GCAGGTGAGGATGACGCCCTCGACGAGGGTGTGCGGGGTGGCCATCATCA12.272727272727273No Hit
GATGGAAACGGCGGCGAAACGCGCCGGCCTCGGTCTGCCCGGCCCCGCCG12.272727272727273No Hit
GATCTGACGGTATCGTCCATATCCGATGGTCAACGCCACCAATCAGTAGG12.272727272727273No Hit
AGACAAAGCACGCCACGCCGCCAGTCAAATTCATGCACCCGGACTCCTGT12.272727272727273No Hit
GTAGTAGACCGCGAAGGTGTTGCGCTTGTCGAGCGTCGCGAAGAACTCCT12.272727272727273No Hit
CTCTCACTTCATTTACCCAGCGGTAAACGTTCGATCGCCCAACGCCTAGC12.272727272727273No Hit
GTATTAATACTGTCACACTGGGAAGGGGGAACAGCTTGGGGAAAGATTTT12.272727272727273No Hit
CTGGGGGCAAGCGCGATGGTGCTCGACGCCGTGCTCGCCCCGCGCTCGGT12.272727272727273No Hit
GCCATAGTTTGCGCCTGGCGTAGATCCTGAATGCCGATGCTCGCCAAACG12.272727272727273No Hit
GCGCATTGGCGAGGCAGAAGAAGGCGATCGGCATCACCACCGCGCCGTCG12.272727272727273No Hit
ACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCA12.272727272727273No Hit
GTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAA12.272727272727273No Hit
GTACGGGCGCCACTGGGCAGGCTGGCGTACGCGCGGTCCGGCGACAAGGG12.272727272727273No Hit
CTTCATCGCCGAGGAATATCCGGAAGGCTTCCACGGCGCCGCGACCTCGG12.272727272727273No Hit
GATTACCGCAAAAACCAACCGATCCTCAATATGATCATCATCTGTCTCTT12.272727272727273No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)