FastQCFastQC Report
Tue 10 May 2022
EGAF00003664641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003664641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences670041
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26960.4023634374612897No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13270.19804758216288254No Hit
GTACATGGGATCGACCTGAGATCAGGCAAGGACACCCGCTGAACTTAAGC13260.1978983375644177No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA11860.17700409377933587No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11810.17625787078701155No Hit
CTTATACACATCTCCGAGCCCACGAGACTGACCCTGATGTATCTCGTATG8230.12282830453658806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)