FastQCFastQC Report
Tue 10 May 2022
EGAF00003664705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003664705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences952415
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16410.1722988403164587No Hit
ATATAAGCCTATGTATTTCAGTAATGCTGCTACAGGGGGATACAAAATCA11630.12211063454481501No Hit
GTATATAAGCCTATGTATTTCAGTAATGCTGCTACAGGGGGATACAAAAT11490.12064068709543635No Hit
CTTATACACATCTCCGAGCCCACGAGACTCCTTCGTTCGTATCTCGTATG10390.10909109999317525No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG9540.10016641905051896No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)