FastQCFastQC Report
Tue 10 May 2022
EGAF00003665237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences240781
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3980.1652954344404251No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA3120.12957833051611214No Hit
CTTATACACATCTCCGAGCCCACGAGACTACACCTGGGTTATCTCGTATG3100.12874770019229093No Hit
CTTATACACATCTCCGAGCCCACGAGACTACACCTGGGTTATCGCGTATG2930.12168734243981046No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2470.1025828449919221No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)