FastQCFastQC Report
Tue 10 May 2022
EGAF00003665673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences388727
Sequences flagged as poor quality0
Sequence length140
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA4110.10572972806108143No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT4040.10392897843473697No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA3910.10058472912866871No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)