FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003665868

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665868
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length140
%GC64

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACTAGACCGCCCAATGAGGATGGCTTCACGGAGGACGACCCTCACGCG314.285714285714285No Hit
GATGTGGCGCCCGCACAAGGTCCGCGTGCGGGTGGGCCCGCCGCTGGACT29.523809523809524No Hit
GTGTGGAGCCGGGACTGTCGGTCACGCACTGGTCGAACTCGCACGGGAGC29.523809523809524No Hit
CACCGGTGCTGGGCGGCGCCGCGGCTGCCGTGATCGTCTTCCCGGACGTC29.523809523809524No Hit
CCCTAGAATTTTATCCGTGTGAATTAAATTTTTCGCTACCGTAGAAATGG14.761904761904762No Hit
GACTGCGACTCGTACTTCGGTCGGTCGCGCGCCCCACAAGAACAACAGAC14.761904761904762No Hit
GGAAGGCATACGGCCCGACATCAGCAAAGCCACGGGACTGGAGTGGCAGC14.761904761904762No Hit
CGCCAGCAACATGGCGCTGGCGGTCGGCGCGGACGGCGCCTTCGTGGCGC14.761904761904762No Hit
GTGCCGAGCCGCGACCGGGGCATCCGCTCGAAGGAGCCGACCAGGGCCTC14.761904761904762No Hit
CCTTTCTTCCGCTGATCCTGTTCTTCATCGCCGGAGCCGGCACACCGGGG14.761904761904762No Hit
GTATCGCAGCGAGTATCCGAGCCGCAGTTAACCGTTGCGATTGCGCCTTC14.761904761904762No Hit
GCCAGTGGATCCGAGCGTAACTGATGGCCAGTGCTGCTCGCATCCCCAGA14.761904761904762No Hit
CCACACGCAAGTGCGCCCGCACCGTATCGCTTTGTACGCCCAGCAGCCGC14.761904761904762No Hit
GCCGGAGGTTCGGGTCCTCGAGGGCCTCCTCGGCGCCCTTCACCACCGGC14.761904761904762No Hit
GTGCGGCAGCTCTTTCAGAAGCATGATTGCTTCCTCCACAGTCGCACAGT14.761904761904762No Hit
GGCCACACCAACGGCCATCATGGCCGGCACCTGTCTCTTATACACATCTG14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)