FastQCFastQC Report
Tue 10 May 2022
EGAF00003665876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences547930
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC8620.15731936561239576No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC8000.14600405161243224No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT7280.13286368696731335No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA6350.1158907159673681No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT6320.11534320077382149No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)