FastQCFastQC Report
Tue 10 May 2022
EGAF00003665916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12883
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA11879.213692462935652No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT7876.108825584103082No Hit
GTACATGGGCTTCAGCCTGCGCCTGCGCAATGCCGAGAAGTCGGTGACCG400.310486687883257No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA320.24838935030660558No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGT310.2406271831095242No Hit
GTACATGGGAGCGTGGTCAGCGTCATCGACCAGTGGTAGAGCGCGAGGTT300.23286501591244274No Hit
GTACATGGGAGGGCAGCAGGGTGGCTGCGACCACGATGGACGCCGCCACC300.23286501591244274No Hit
GCTTCAGCCTGCGCCTGCGCAATGCCGAGAAGTCGGTGACCGACGAGCGC240.18629201272995422No Hit
GTACATGGGTGTCCATCGTGAATCCGGACCAGTACAACCGATACAAGCAA230.17852984553287277No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGT210.16300551113870992No Hit
CACTCACACACACACACACACACACACACACACACACACACACACACACA210.16300551113870992No Hit
GTATCAACGCAGAGTACATGGGAGGGCAGCAGGGTGGCTGCGACCACGAT200.1552433439416285No Hit
GTATCAACGCAGAGTACATGGGCTTCAGCCTGCGCCTGCGCAATGCCGAG200.1552433439416285No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGT190.14748117674454708No Hit
ACGCAGAGTACATGGGCTTCAGCCTGCGCCTGCGCAATGCCGAGAAGTCG190.14748117674454708No Hit
GTACATGGGAAGCCTGGGGATCCCCGCATGGACCGCGGCTTCCGCCGGGT190.14748117674454708No Hit
GTATCAACGCAGAGTACATGGGGCCGCCGAGCGCCAGCCCCTGCGCGAAG190.14748117674454708No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA180.13971900954746566No Hit
GTACATGGGGACGTGGCCGCGAGGATGACGGCCGAGGGCATTCCCGACAC180.13971900954746566No Hit
CTCACACACACACACACACACACACACACACACACACACACACACACACA160.12419467515330279No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT160.12419467515330279No Hit
TTCCAGCACGCTGCAGTCCTCGGGCGTGAGCTTGTTGACCAGGTCGGTCG150.11643250795622137No Hit
GTACATGGGTGGAGCGAAATCGACGATGCGCAGCGCGAAGCCATCGATGC150.11643250795622137No Hit
GTGGTAGAGCGCGAGGTTTCCCGAGAAGATGAAGCCCACGAGGATGAGCT150.11643250795622137No Hit
GTGCATCACGACGATGCGGTCGGCCATGGTCATGGCCTCGATCTGGTCGT150.11643250795622137No Hit
CACACACACACACACACACACACACACACACACACACACACACACACAAA150.11643250795622137No Hit
CACACACACTCACACACACACACACACACACACACACACACACACACACA150.11643250795622137No Hit
CCTCCACGCCGTGCGAGCCGCCGCCCAGCGTCATGTCGCCGGGGCGGACG150.11643250795622137No Hit
TTGCATGGGTGCTGCAATGACGCGAACACAAGCAATGCAGGAGATGCCCA150.11643250795622137No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGT140.10867034075913995No Hit
GCCATGGGCCGCGCCATCGTGCGCGACCCGCAGGTTTTCCTCTTCGACGA140.10867034075913995No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGT140.10867034075913995No Hit
GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT140.10867034075913995No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG140.10867034075913995No Hit
CGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCT140.10867034075913995No Hit
TCCCGACACCGAGCCGCTCGTCGCCTGGGGATTCGATCCGATCTACTTCG140.10867034075913995No Hit
GTACATGGGCGTCGATCATCTGGCCGTGCTGCAGCGTGTGGCGGTGGTCG140.10867034075913995No Hit
GTGAATAGGTGGGAAGCAGGCCGATCAGAAAAGTGGACAGCCCCATGATC130.10090817356205853No Hit
TTCTTAGCCTTCCCACTCCCGCCCTCTCTCAAGCTCCGGTGCCCACAAGC130.10090817356205853No Hit
GTATCAACGCAGAGTACATGGGCACACACACACACACACACACACACACA130.10090817356205853No Hit
TATCAACGCAGAGTACATGGGCTTCAGCCTGCGCCTGCGCAATGCCGAGA130.10090817356205853No Hit
GGCTCCACCACGACGACCCTGGCCTCCACGCCGTGCGAGCCGCCGCCCAG130.10090817356205853No Hit
GAGTACATGGGCTTCAGCCTGCGCCTGCGCAATGCCGAGAAGTCGGTGAC130.10090817356205853No Hit
GCCTGCGCCTGCGCAATGCCGAGAAGTCGGTGACCGACGAGCGCGTGGCC130.10090817356205853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)