FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003665943

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665943
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAGCATGTTGGCCAGGCCGCCCACTTCGCGGCCGCCCATCGCATTCGG44.040404040404041No Hit
GCCGCCCGCACAGGAGGATGTGCCCGGCACGAAGGTCGCCGCGCACACGC33.0303030303030303No Hit
AGGTCGTACTGGCCCAGCGTCCAGTAGATCGCCTTCATGTCGATGCCGGC33.0303030303030303No Hit
TCCCCTAGGTATTGCACAAAGCTTGCCATGGGCGGGTGACCATTTTGCGT33.0303030303030303No Hit
GCACCCGTCCCTCGCGGGCCCTGCCGTACGAGCTGCACGTCAGCGCCCGC33.0303030303030303No Hit
CCAGAACCTTGGCCGAGGCCTTGCACGAGCGAGCCTGCGCTCACGGTGGC33.0303030303030303No Hit
GGATAAAGAGGGGAGGCCTGTCTGAGCGAAGCGAGTTTGCCTCCCCTCCC22.0202020202020203No Hit
CCGTGGCCGTGTGCCACGGTGGCGATGTCGAAGCCGGGCCCGCTGTCTCG22.0202020202020203No Hit
CTTCGTACTTGATCGCGTCATCCTCAGCTGAATATTCACTAAGTGGCCGC22.0202020202020203No Hit
GAAGCGTAGAACTTGAGCGCGTTACCGCCCGTGGTGGTTTCCGGCGAACC22.0202020202020203No Hit
GTCGTAGGCGTGCAGCGAAATCGCGCGCGGCCCTGCAGCAAGCGCGGATG22.0202020202020203No Hit
GCTGTTCATCGGCACGTTCGTCGGCGCCATCACGTTTTCGGGTTCGGTGA22.0202020202020203No Hit
GAGCAGGACGGCGCCGTGGTCATGGGGCTCACGTCTCCAGAAGGCGATGC22.0202020202020203No Hit
AGCACCTGCTGCAGTTTGCGCAGATGGCCTCGGCGATGGTGTCGGTGGTC22.0202020202020203No Hit
GTTGAGGCGCTGATGTCGGGGCACCCATTGGGGGCCGCAGCAGAGTACGC22.0202020202020203No Hit
AACTCGATCAGCTCGCCCAGGTACATGTACGCCGTGTAGTCGGAGCAACG22.0202020202020203No Hit
ACATGGGCGCGTTGGCGGCGATGGTCTGCACGCGCGTCTTCATGTGATCG22.0202020202020203No Hit
TCCATGGGAAGCCCTGTTTTAGACCTGATTATGGAAATCGGTATAAATTA22.0202020202020203No Hit
CACGACGTGGATGCGGCCAAGGAAGCGGCCCATCCACTCAAGCGTGTGGT11.0101010101010102No Hit
GTGTGCAAAGCACGGGACGATATGCGTTTTATCGCCGGGCAGGCGCCCAC11.0101010101010102No Hit
GAGTTGATCAGACCAATGTTCGGACCTTCCGGCGTTTCGATCGGGCACAC11.0101010101010102No Hit
CTCGACGGCGAGATCGTGGTGTGGCATGCGGGCCGCGTACAGCCGTTTGC11.0101010101010102No Hit
GTGCCGTGGGAACGAAGGTTTGACGCAGCGCCGCCGCCCACGAGACAGGC11.0101010101010102No Hit
CTCCGTTCACCCTGGTTGGATGTCCGCCATGCGCACATCGGTCAGCAGCG11.0101010101010102No Hit
GTACTCGGTCAACCTGCGCATCATGGGCAAGCCGAACGTGCCGCTCATCT11.0101010101010102No Hit
GATGTCCTGCAGGCCTGGCAGCCAGAACGGATCGTCATGCGCGTGCTGGC11.0101010101010102No Hit
CCTGCACCCAGCCCGTGGCGTCGCCGCAGCCGCACTCCACCCAGCCGCGC11.0101010101010102No Hit
GCACCCGTCCCTCGCGGGCCCAGCCGTACGAGCTGCACGTCAGCGCCCGC11.0101010101010102No Hit
CTCTTGATCTTGGTGCGGATTTCTTTTGTTCCGGCCATTTCACTCTCTCC11.0101010101010102No Hit
TGCCATGAAGCGCGTGCGCGACGAGATGGGCCTGACCAACGTCGAAGTGA11.0101010101010102No Hit
TCGAAGAGTGCAAGCACGGCAGTGTCATGGAAGCCGACATGGCCACCATG11.0101010101010102No Hit
TTCCAGCTCGGTCGGCAGCGGGAACGCGTTGAGGTCGTACATCTTGCAGA11.0101010101010102No Hit
CTACCAGCTTGATGCCCTGCAGAAGGGTTGGCGCATGCGCAATCAGCAGC11.0101010101010102No Hit
GGGTATCAGTCGGCACGGCATGCGCGTGGAATTCCGCCTTGCCTGACGGC11.0101010101010102No Hit
GTTCCCACTCGGGCACCGTCCATAGCTCGCCGTCAATGCGCAACTGAAAT11.0101010101010102No Hit
GGTCATTGCGCTCGAGCGGGCGCAGGCAGAGGTCGCGGGATTTTTCGATC11.0101010101010102No Hit
GAATAGCACGGAATTGAATTGAATGGAATGGAATGCAATGGAATCTAATG11.0101010101010102No Hit
GCGTGGCGCCTCCTGCCCCTGGCCGGGCTGCGTCGCATAGCGAATCGGCA11.0101010101010102No Hit
GCCTTGGTGGAGCGCGGTCCGCGTGACGGCAGCGGTGCCGCGGCGTACGT11.0101010101010102No Hit
TGGCGTGCTGCTCGGCCAGCAGCTTGACGGATTCGGCCTGCTGCAGGATC11.0101010101010102No Hit
TGCACGGGCAGGACGCCCGTTTTCTCTTCGCCGATATTGCCGGCGCTGAC11.0101010101010102No Hit
GTCGACTACGGCGCGCTGTATACATTAGTGATGCGGTATCGCGCGCTGGG11.0101010101010102No Hit
CCCTTCAATCTCGTTCACTCCCCACCGTCAACCCCTCCGCCGCAAATGGC11.0101010101010102No Hit
GAAGAAGCCAGGTGTGGAACTCACGCGTTAGGAGATGCTCAAGTTATTCG11.0101010101010102No Hit
ACCTGGTGTGCCGGCGATGGGCAAGTGGACGCCACCGTGCCCGCAAAACG11.0101010101010102No Hit
CGACACTTCAAGGCGATGGTCCTTCAGAGCCTCCTTCTTGTCCGGTCTTC11.0101010101010102No Hit
ATATGAAGAAGATCTCCCTCGCAATCTCGTTCAATCTGGGCGCGCTGATG11.0101010101010102No Hit
GATCTCGCCCTTGGGCGTGAACACGTAGACCGCATCTGGGAACAGATCGA11.0101010101010102No Hit
GACCAGGGGGTGGCGACTGTTTATCTAAAACACAGGGCTCTGCGAAGTCT11.0101010101010102No Hit
GATCAGCGGTGTGTTGCGCAAGCGCCTGCAACTGCTGGTGATCTGCGAAA11.0101010101010102No Hit
CTCATCAAGGCCCTGCGCGCTGATCGCTGGGGCAACCTCGTCTATCGCAA11.0101010101010102No Hit
GTGAAGCGAAGGGGAACGCCGCTCCCTTCGGGGAACATGGTTCCCCGTCT11.0101010101010102No Hit
GAAGAATAGCGCCGTTGAATACGCAAAACTGGTCCGTATAATCGCGCAGC11.0101010101010102No Hit
CCTTGCGGGTGTACGGGCTGGCGTGCGATCCGATCAGTTTCATAGGCATG11.0101010101010102No Hit
GCTCGACGGCATCCAGACCCCGATCGACTTCACGCCCGAGCAATGGGCTG11.0101010101010102No Hit
GTTCATGGTCTTCGCGCTACGCGGGACGCCTGTCGGATTCAGCGCATTTA11.0101010101010102No Hit
TCGTACACCTGCGCCAGCCCCATCTGCCCGACGGCGGCGGCGGCCTGCAG11.0101010101010102No Hit
GCCATCGACGACGCCCTGCTCGAACATCCGAACAGCGACGATCTGCAATC11.0101010101010102No Hit
GCGCAGTACGGCGCGGATGCGGGCATGCAGCTCGCCCGTGTCACACGGTT11.0101010101010102No Hit
GACTGGAGCTAAGTGGATACCCCTTACATAACAACAGTATAGAAGCCAAG11.0101010101010102No Hit
GTTTGCGGCGCATTGCACGGAGTTGCAGCGCGTTGATTAACGTTTGCGGA11.0101010101010102No Hit
GTCGACGATGCGGCCGAGGAAGTCGAACAGCGCGACTTCAATCAGCGCGC11.0101010101010102No Hit
GTGGACGATGCCATCGTGGTGGTGGAAAACGTCGAACGCGTGATGCACGA11.0101010101010102No Hit
TCATCGAACTGACCTACAACTACGGGGTGAGCGAGTACGAACTCGGCACG11.0101010101010102No Hit
ATCCATTGTTGGTCTTCGCGATCGCGCCAGACCTCTCCATCACGATCACG11.0101010101010102No Hit
GGGTTGCGCTGGGTCGTGCCGGTCGACAGGGTCTCGATGGCGCTTTTGGC11.0101010101010102No Hit
GTACTTGGTCTCGGCCAGCATGTGCGACGGGAGCACCGGCTTGATGATCT11.0101010101010102No Hit
CGACATCGTGGCCGCCTGCCTGCTCAGCCAGGCCGGCCAGGTGGTGCGCG11.0101010101010102No Hit
GTGTGTTCCACCGTGATGCAGCCGTCGCCGACGGTGGTCTGTCGATCGCC11.0101010101010102No Hit
GCATGTGACGCGCTTTGTCGCCATTGATGAAGAGAACCCATATTTCACGA11.0101010101010102No Hit
AACGAGAAGGCGTCGTTCTCTATCGGCTACGACCAGAGCATCATCGGGCC11.0101010101010102No Hit
TACATCAGCCGCCGTTCTTCTTCGATCTTCTCGTCGGTCAACTCATCGTC11.0101010101010102No Hit
TTGCAGCCGCATGCGGCCGCCGGCTTGTCATATCGGCTGGCTACCACCGT11.0101010101010102No Hit
CATCACCGCTGCGTCCTACCCAACCCAGCCGTGGCGCGTCTGGTACGCCT11.0101010101010102No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)