FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003665971

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665971
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCACACCATGCACGTTGGCCGGGCCGGAGACGCCTTTGGGGACACAG43.669724770642202No Hit
CTCCACAGGTAGCTCTAGGAGGGCTGGCAACTTAGAGGTGGGGAGCAGAG32.7522935779816518No Hit
GTATCGTTCCGCCTGGGCGGGATTCTGACTTAGAGGCGTTCAGTCATAAT32.7522935779816518No Hit
GTCAAAGGTCATCTGGTAGCCAGCAAGCCAGCCCTCATAACCAAAGACAG32.7522935779816518No Hit
GAATGTAGACAAATTGGAAGCCTCATACACCGCTGGTAGAAATATGAAAC21.834862385321101No Hit
GACCCCAACTCATCTTCTCTTAGTTGATTTAAATTCTGAATATTTGTTCT21.834862385321101No Hit
CTGTGGCAAGGAGCAGCGTCGTGCAGTGGTGATGATCTCCTGCAATCGAC21.834862385321101No Hit
ACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGAT21.834862385321101No Hit
ACCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAAGTAGGGACC21.834862385321101No Hit
AAGCGTCAGATGTGTATAAGAGACAGTGGCCACCCAGAGCAGTCATGCCT21.834862385321101No Hit
CAATAAAACATCTGTTGCTCTCTGCTGATGAGCAAAAAACTTGCTATACG21.834862385321101No Hit
CAGCCAGTTACTTCATGCTTTTCTGGGCCACCCCGGGTCTGAATGGCCAG21.834862385321101No Hit
GTATTCAAGGTAAAAATTGAAGTTTGTATGATGTAAGAGATGAGAAAAAC21.834862385321101No Hit
GTGCCCAGGTGGCCGTCGACCTGCTTGACCGCGTCGTCGTAGGGCTTTCG21.834862385321101No Hit
ATTGTGAACTTTGGGGGATGCTCGCTCCAACCGACTGCTGTCACCTTCAC21.834862385321101No Hit
TAGTAACATCAAAGATTAGGTGAGGTTTATAGAAAGATAGATATCCAGGC21.834862385321101No Hit
AATGGAATCAACATCAAATGGAATCAAATGGAATCATTGAACGGAATTGA21.834862385321101No Hit
GTACATGGGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAA21.834862385321101Clontech Universal Primer Mix Long (95% over 21bp)
TTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTGCCTACCAT21.834862385321101No Hit
TAACGAACGAGACTCTGGCATGCTAACTAGTTACGCGACCCCCGAGCGGT10.9174311926605505No Hit
GTCATCTTCTGCAACACCAAAAGAAAGGTGGACTGGCTGACGGAGAAAAT10.9174311926605505No Hit
GTCTTATCTCGAGAGGCGGAGAGGATCATGTCCGGGAACTGCGGGGTAGT10.9174311926605505No Hit
AACCAGGACACCCACCTCAGCTGGCGTGATGTTGACGAACGTTTTCCCGG10.9174311926605505No Hit
TCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCC10.9174311926605505No Hit
CCCACTAATAGGGAACGTGAGCTGGGTTAGACCGTCGTGAGACAGGTTAG10.9174311926605505No Hit
CATATAAATATGACAACAGTTATAATCTGAGCATTTTGAGAGCTTGAAGT10.9174311926605505No Hit
CATTGGAGCAGAAGCTGAAGCAGGATCAAAAAGTCCTTAAGAAAGCTGGG10.9174311926605505No Hit
CCCCATCACCCGTGGTCACCATGGTAGGCACGGCGACTACCATCGAAAGT10.9174311926605505No Hit
AGGCTGAAAGGGGGCAGTGAAGTCGGACGGACTCAACGCCCCTCTTTACA10.9174311926605505No Hit
AACATATGATGAGCTTCTATCAGGAAGAGCACAAGGCTTTCACCTTCTCT10.9174311926605505No Hit
CGCCTGGATACCGCAGCTAGGACTAATGGAATAGGACCGCGGTTCTATTT10.9174311926605505No Hit
AAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACT10.9174311926605505No Hit
ATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCT10.9174311926605505No Hit
GTCTCCTTCTTAATCATGGTGATCCTGTTTGTTTATATGGAAAGAAACTC10.9174311926605505No Hit
GCGTTTGAACTTGGCTCTCTCTCGAGGCTCGATCATATTCCTCCTCTGGA10.9174311926605505No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG10.9174311926605505No Hit
CGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC10.9174311926605505No Hit
GTGCTTCACCTCTGGGGTCCACTTCTCAGGAATGTTTTCCAGGCTGTCAG10.9174311926605505No Hit
CTGATATGGCGGCGGTCGGTTTCCAGTTTCGTTTCCCCGGGACCTCTTGC10.9174311926605505No Hit
GTCTTCAGAATTTGGTTGACTTTGACCTCATCAAATTCCAAACACAGAAA10.9174311926605505No Hit
GGGATGAAGAGGGAGATATTCAGAACCCTTCACCAGATTCCCCCCAACTT10.9174311926605505No Hit
GCCTACGACGGCAAGGATTACATCGCCCTGAACGAGGACCTGCGCTCCTG10.9174311926605505No Hit
GCCGTCAACTACGCATCGAGCCCTGCGCAGGCCGACGCCCTCGTCGCCGA10.9174311926605505No Hit
GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGT10.9174311926605505No Hit
GAGAAACAGCCTCCAATCAGGAACTGAACTGTTCACCAGGCTTTTTGCAT10.9174311926605505No Hit
ATCTTGTGTACCAAGAACCCATTCCTACAGCTCAGCTGGTACAGAGAGTA10.9174311926605505No Hit
CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAAC10.9174311926605505No Hit
GAACTAATGTGTTCTTCAAAGAAAGCAGACAGGCGCAAACTCATGCTGTA10.9174311926605505No Hit
ATCCTCCAGAGAGCAAGTGGTGGAAAACTCTGAGAGAAAAAATGAAGAGC10.9174311926605505No Hit
GCCCCTGGATGAAACACTGAAGAAAGCCCTTACAGGTCACCTTGAGGAGG10.9174311926605505No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG10.9174311926605505No Hit
ACATGGAACAGGCTCTCAGCCCTTCTGTTTTCAAGGCCATCATGGAGAAA10.9174311926605505No Hit
CATATAAATATGACAACAGTTATAATCTGAGCCTTTGGAGAGCTTGAAGT10.9174311926605505No Hit
GTAGAGGAGGCTTGGGTATTGATAGTAAGGCAGAGTTCTAATCAAGCAGA10.9174311926605505No Hit
CCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGAC10.9174311926605505No Hit
ATCTGCAAGTGGATATTTGGATAACTTTGAAGATTTCGTTGGAAACGGGA10.9174311926605505No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGACTAGGACCGCGGTTCTA10.9174311926605505No Hit
CCTTGAGGAAGCCCACTCTATTTTTGGTAGCATGACGGGCCACTGAGAGG10.9174311926605505No Hit
TTTTTCAACAGATGATTATTTGGACCACCTTCTTTTTCATTCACGTACAC10.9174311926605505No Hit
CATTAAATCAGTTATGGTTCCTTTGGTCGCTCGCTCATCTCCTACTTGGA10.9174311926605505No Hit
GGTGAGATATTTCTTAACAACAACAACAACAACAAAAAAAAACAGGTTGT10.9174311926605505No Hit
GTAATGGAGAGTGAAGAGTTCATGTTGCTTCCAGCCAATCAACTCATTGA10.9174311926605505No Hit
CTACGTTGCAGACTCGCCTGACTTATTTTTACGCTTAACAGCCAATGAGT10.9174311926605505No Hit
TTAGGACAACAAAATTACCATCAAAATTAGTTGATTCAGTTTAACTGTTT10.9174311926605505No Hit
GTATATGGTCAAGATTACAGGTGGTAAGGAATAGGCTAGAGAATAGGAAT10.9174311926605505No Hit
GCTAAGGAACGTGCATAGACCTTGAAAGAGAGGGTCAAGGCTGCAAAGCT10.9174311926605505No Hit
CCCAATGGCAACAAGACAAAGATGGCAAGACAGGCTACAATGTGTGTGGC10.9174311926605505No Hit
ATAGAAGTACAGTTGTTACATATTTAATGAATACAATTTGATGGGTCTGA10.9174311926605505No Hit
ACACACACATTTATTGATTATATTTGCCATTTTACATGGGTGCGGCTTTT10.9174311926605505No Hit
ACTTAAGCGCGGTGGCCTCCCCTATCCCCTACGAGGCTACCCGGATCGAT10.9174311926605505No Hit
AGCATGGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTT10.9174311926605505No Hit
GGTTCAACCAGTACATGTATTTTGAATGGTTTCCCACTTTCAAATGGGAA10.9174311926605505No Hit
AGGCAGCTGTCTTCATTACATTACATTAGGGCTCCAGGAGCCTTCTGCCC10.9174311926605505No Hit
GTATCGCGCGGCCGAATGGCAGGCGAGCCACCACGCGAGGGGTGAGCAGC10.9174311926605505No Hit
ATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCG10.9174311926605505No Hit
CCCATGTTTAGATCCAGGTCTCCAATTCATGGTTATCAGGGCATGTGTTC10.9174311926605505No Hit
GCCCCCCGGCCACACACTCTTCAGCGGCATCTCGGACCGCATGCTACAGG10.9174311926605505No Hit
CGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTATTT10.9174311926605505No Hit
GTATTTGAAGTGCCTTAAAGATGATCATGGTTCAGAATATCTTCAGAGAA10.9174311926605505No Hit
CATTCAGGTAATGTGTCTCAATGAAGTCACACAAATGGGGGTCATTTTTG10.9174311926605505No Hit
GTTAAGAACCTGAATATAAATTTGTTTTCTCAAATATTTGCTATGAAGGG10.9174311926605505No Hit
GAGTTAGATTACTCAATAGCCAATACCCTGAAAGCTTGGGAAGCATTTAT10.9174311926605505No Hit
GTACAGATGCACGGGAGGTCATACGGTTTAGGCAAAGGGGAGCACAAAAG10.9174311926605505No Hit
GGTGAGGGGCAGCTGTGGTCACAGCTACTCGGCAGGCTGAGGTGGGAGGA10.9174311926605505No Hit
AACATGATCTTTCTGCTCCGCTGAGAAGTACACCTTTTTGCTAGCATCTC10.9174311926605505No Hit

[OK]Adapter Content

Adapter graph