FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003665972

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665972
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCTGGACGGGATTCGAGGGCAGCTGGCGGGGGCTGCATAGCCCCTGAG43.669724770642202No Hit
GTACATGGGAGGGAACGTGAGCTGGGTTAGACCGTCGTGAGACAGGTTAG32.7522935779816518No Hit
AGTGGTGTGAGTATGGTCTGACTTTCACAGAAAAGTGGAACACTGATAAC32.7522935779816518No Hit
AATTCTAAGCAGAGTATGTAAATTGGAAGTTAACTTATGCACGCTTAACT32.7522935779816518No Hit
GCTCTGTTTCTCTGGGACATAGGGTACTCCATCAGCTCAGCCTTGGGATA21.834862385321101No Hit
ATGTTATGACAATTCATGTACAGGTTTTGTGTAGACAAATGTTTTATTTT21.834862385321101No Hit
GAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATT21.834862385321101No Hit
GTGTGGATCGGCGGCTCCATCCTGGCCTCGCTGTCCACCTTCCAGCAGAT21.834862385321101No Hit
GTCCGGGCCGGGTGAGGTTTCCCGTGTTGCGTCAAATTAAGCCGCAGGCT21.834862385321101No Hit
AACTTACCCAGTGTTATAAACAAATAAAAGACATGCAAGAACAAGGCCAG21.834862385321101No Hit
GGAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTT21.834862385321101No Hit
GTTTACTAAAGGTTTTACTATTATGGTTTGAAGTGGAGTCTCATGACCTC21.834862385321101No Hit
TTCCTATGCTGCTTCTACAATGTTACATCAACTATACTTAGCTTTACTCT21.834862385321101No Hit
ACCTACCCGAGCGGCTGCCAGCTGCGCGCCGCCAGCCAGAGGGCCGAGAG21.834862385321101No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA21.834862385321101No Hit
CAACGAGGCCGGTTACCGGCAGTCCACCCGCGCGCTCGCCGACATCGACG21.834862385321101No Hit
GGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAG21.834862385321101No Hit
CAACAACATAAACAGCAACCAGTGATGCAAACGTGACAAGTAAGATGGAA21.834862385321101No Hit
GAATGGAATGGAATCATCGCATAGAATCGAATAATTCCATTCGATTCTAT21.834862385321101No Hit
TCTCATAACTCTGTGATATTGCTCTCGGTGCTTCCAACTCATCCACGTCC21.834862385321101No Hit
CATTCAAGGAAGAACCTTCTGTCCCAGCTTTGCAGAATGAAAAGCTTTCC10.9174311926605505No Hit
GTCCGGACGGCAGCGCGTGCCCCGAGCTCTCCGCCTCCCCCCGCCCGCCA10.9174311926605505No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.9174311926605505No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.9174311926605505No Hit
CCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGG10.9174311926605505No Hit
GGTCATGGGAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCG10.9174311926605505No Hit
GGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAG10.9174311926605505No Hit
CTGTAGAAATAAGCACTCGGCTGGCGCCCGACCGGAACTCCTTCATGATG10.9174311926605505No Hit
GCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTG10.9174311926605505No Hit
GTTTCAAACCTGCTCTATGAAAGCGAATGTTCAACTCTGTGACGTGAATG10.9174311926605505No Hit
GGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCTGCCGTATCGT10.9174311926605505No Hit
GTAGTAGAGTGGCGTATTTTTTCCCTTTTTTAATTGTCCAGTTTTTGTTT10.9174311926605505No Hit
GCCACCAGAACTTCGCCTTGTTCTTCCAGCTGGTAGATGTGAACACTGGT10.9174311926605505No Hit
TCTCCTTGGTGTATTTGTCCTGTGAGTGTCTGACTCTATCACTTTCAAAG10.9174311926605505No Hit
GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGC10.9174311926605505No Hit
GGGGCGAGGAGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAG10.9174311926605505No Hit
TGCTGCCAAATTCACATTATGAGCAAGTCATGACTGCATTTGGAGGCAAA10.9174311926605505No Hit
GCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTCAT10.9174311926605505No Hit
GTGGTGATGTGATCTTGAATTTTCAATCAAACAGATCTGGGTTGAATTGT10.9174311926605505No Hit
CCGCAGGGTAGAAGCCCAGGGCCCAGCACCTCAGGGTGGCCTCATGGTCA10.9174311926605505No Hit
GGGTACAGCAGGCCGCGTTGCGGGCCGCCCGGCTCCGGCACCAGGAGCTG10.9174311926605505No Hit
GCAAGAAACACCTTGAAAGCATTTGTATCAGATAATAAAATGGCTCCCTT10.9174311926605505No Hit
TCAACATATCCTGGTTCGTGCTGCAGGCCGGCTACGTGCCCTATGCGGTG10.9174311926605505No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG10.9174311926605505No Hit
GCGTATAGTGGAACCTTATGTGACCTGGGGATTTCCAAATCTGAAGTCTG10.9174311926605505No Hit
GGAAAACAAAGCAAGGGCAGTGTTGGGGCATCAGACCAGGGCAGGGCTGG10.9174311926605505No Hit
CAGTAAATGCAGCCCATCCAGAATCCTGGAGCAATAAAGTAAGAAGTAAT10.9174311926605505No Hit
GTATAAAGCTTCAGTTATGCAAGACAAGTAAGGTCTAAAGATCTGTTGTA10.9174311926605505No Hit
TCTTACTACTTTGACCGCGATGATGTGGCTTTGAAGAACTTTGCCAAATA10.9174311926605505No Hit
AATTAATTCATTTTGATTAAGTCCACTTAATAATTATGGCTGTGTTAGAT10.9174311926605505No Hit
TAATGGTTCTTCGTCAGCCAAGGGGACCAGATAACTCAATGGGGTTTGGT10.9174311926605505No Hit
AGACAACCGTGTGGATAAGCCCAAGCTGGCCTGCTAGAAATTGAGAGCCC10.9174311926605505No Hit
GGAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAACCTCACCCGG10.9174311926605505No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA10.9174311926605505No Hit
AAAATTAGCTGGGCGCAGAGGCACGGGCCTGTAGTCCCAGCTACTCAGGA10.9174311926605505No Hit
GAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCCGT10.9174311926605505No Hit
ATCCGAAAGAAGCTGGTGATCGTTGGGGATGGTGCCTGTGGGAAGACCTG10.9174311926605505No Hit
ATTTGACTCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTG10.9174311926605505No Hit
CTGCACTTCAAAGACCAGCAGGGTGCGGGCCACAGAGATGGCGGAGGCTG10.9174311926605505No Hit
GTTTACTGAGATCTTCTCCACACTCTTGAGTCAACCGAGACTGGATCATG10.9174311926605505No Hit
AGCTGTACGGTCGCACTGAACTCGGATAGGTCTCAGAAAAACGAAATATA10.9174311926605505No Hit
GTCATGACCTCGATCCATCGCGTATAGGGACGCCCCCTGCTCGCGTTACT10.9174311926605505No Hit
ATACCATATAAAAGCTATTAGTTGACATGGCTAAATTCACCTAAGAGCCA10.9174311926605505No Hit
CCGTTGTTATAATCGACCCGGGCTGCGACAATCGGCCGTATGCGGCGGTT10.9174311926605505No Hit
GCAGAAGCCACACAATGTCACCTGTACATGCTCCATATGCGTCTCTAACG10.9174311926605505No Hit
ACCCAGAATCAAGTAAGTCTGTCAGTGCCGTTTCCCAACAGCATATGCTT10.9174311926605505No Hit
GCCCAGTTGGTGCCACCATCTTCCATCCAATCACTAATGCTAGAAACCCG10.9174311926605505No Hit
CCCTTAAGTTTCATAAGGGCTATCGTAGTTTTCTGGGGTAGAAAATGTAG10.9174311926605505No Hit
ATTGAAGTGAAGATGATTGACCGCACGCAATTGATATTAGATATTTTTGC10.9174311926605505No Hit
TTTTTAGCCTCATCTACCAAGTCTCTGCATTCTTCATCACTTTTGATGAG10.9174311926605505No Hit
TATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGA10.9174311926605505No Hit
GTCGAAGGTCTGGTCGTACTGCGCGTCGCTGTGCTCGGCCAGCGGCAGGG10.9174311926605505No Hit
ATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGC10.9174311926605505No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTT10.9174311926605505No Hit
GGGTTACCCAGCCGTTGTGGGCCCTTTTGGGTGCCCCGAAGGGTGGAGGA10.9174311926605505No Hit
GGGCTACTGTGTCTGGTATGGCTCAGCCTTTGCCCAGGCTTTGCTGCTAG10.9174311926605505No Hit
GCAGCACGAAGTTCATCAGCATCAAATTGCGCTGGAGTTTTTAGCAGAGC10.9174311926605505No Hit
TCATCATCTGCTTCAAATCAAAGGCAGCCTGGGGATCCAAACCAGTCAAG10.9174311926605505No Hit
CCAGAGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAAC10.9174311926605505No Hit
TGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGT10.9174311926605505No Hit
GGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCTCG10.9174311926605505No Hit
GAATGAGGCTGTTGGACGAGAACTGCTCATTTTCTTGGCCCAGTACCTAT10.9174311926605505No Hit
AGATGGATCTGACTGAAATAAATATGGTCGTCCCTCATTCCAACCACAAA10.9174311926605505No Hit
ATGTGAAGATTCAGAGCCTTTCCGTCAGCCGGTAGATCTCCTTGAATATC10.9174311926605505No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)