FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003665975

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665975
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2640
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.3787878787878788No Hit
GTACATGGGACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCATC60.22727272727272727No Hit
GGTACACTCAACTGCAATTGAAGCTGCTGCTTCTCTGCTGCCAGGTCATG60.22727272727272727No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.22727272727272727No Hit
CAGCTGACCGGACCGGTCATGCCCGTCCGGAACGTCTATAAGAAGGAGAA50.1893939393939394No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT50.1893939393939394No Hit
AAGCCAGAGTGCAATGGCACAATCTTGGCTCGCTGCAATCTCTGCCTTCC50.1893939393939394No Hit
GTGTGGACCTGCGGGTCCGAAAGGAACTTGCGCATCTGCTCCAGGGCGCT50.1893939393939394No Hit
GTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTC50.1893939393939394No Hit
GTCCCTGAACTCTCGCTTTCTTTTTAATCCCCTGCATCGGATCACCGGCG50.1893939393939394No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.1893939393939394No Hit
GTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTC40.15151515151515152No Hit
CTTCTAAGTCTTCATATTTTCTCTTAAAATCTTAAGCTATTAAAATTACG40.15151515151515152No Hit
CCCTGCGGGTGAAGAACTTCGGGATCTGGCTGCGCTATGACTCCCGGAGC40.15151515151515152No Hit
GTGTGGACCTGCGGGTCCGAAAGGAACTTGCGCATCTGCTTCAGGGCGCT40.15151515151515152No Hit
GCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGT40.15151515151515152No Hit
CACCAGCTCCGAAATCACCACCAAGGACTTAAAGGAGAAGAAGGAAGTTG40.15151515151515152No Hit
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT40.15151515151515152No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC40.15151515151515152No Hit
CGACTCCACAGATACCCCGAAGCCATGGCAAGCAAGGGCTTGCAGGACCT40.15151515151515152No Hit
TTTCAGGAGGCCGAATTTTTTTCCAATCCCAGAGAAGGTGTCAGAGGCCT40.15151515151515152No Hit
GACCCCCAGAGGGTGTCTCCATCTTCCCTATTTATTTTCAGCCCTTGAGG40.15151515151515152No Hit
GTGTTTATTGAGATGGTTTCCCACTCATCTTGACTCAGAGTGCTTTTAGT40.15151515151515152No Hit
GCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGC40.15151515151515152No Hit
CCTCTGAGGAAACCATTTCTACAGTTCAAGAAAAGCAACAAAATATTTCT40.15151515151515152No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT40.15151515151515152No Hit
GTTCAAACCATTTACTAAGCAGATTCTTAGCCTTCCCACTCCCGCCCTCT40.15151515151515152No Hit
GTACATGGGACTGCACAGAGTGAGACTCTGACTCAAAAAAAAAAGAAACA40.15151515151515152No Hit
CAGCTGGATCCTACGGTTCAAGGAGGCCACCTCAGCCTCAGCCTGTTCCC40.15151515151515152No Hit
ACCTGATCCCGTTCAGAGATGAACAGAATCATCTAGGTCGTTAAGAACAG40.15151515151515152No Hit
ATTGTCTACTGTGGGCAGGTGTTTGAGAAGTCCCCCCTGCGGGTGAAGAA40.15151515151515152No Hit
CCCAAGTCTCCCTGCTGTCATTTCAGGAGGCCGACCCAAGTCTCCCTGCT30.11363636363636363No Hit
TTACTAAGCAGATTCTTAGCCTTCCCACTCCCGCCCTCTCTCAAGCTCCG30.11363636363636363No Hit
ACCTGAAGCAACAGGTGGAGGGGACCGCCCAGGAAGCCGTGTCAGCGGCC30.11363636363636363No Hit
GGATTGAATACAGAGACGCTGTCTGCTTGCTGCCTTAAGACAGCTAGCTG30.11363636363636363No Hit
GGTGTAGGCGGGTGGAGAAGGATCGGGGCCCTCGCCGCTCTGTCTCATTC30.11363636363636363No Hit
GTACATGGGACCAGACCAACAAAGCCAAGCATGATGAGCTGACCTATTTC30.11363636363636363No Hit
ATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTG30.11363636363636363No Hit
ATCCTACGGTTCAAGGAGGCCACCTCAGCCTCAGCCTGTTCCCGGGCCCG30.11363636363636363No Hit
CCTTTAAGTCCTTGGTGGTGATTTCGGAGCTGGTGTCTACGGCTGCGTCT30.11363636363636363No Hit
GGGTTCACACCATTCTCCTGCCTTGGCCTCCCAAGTAGCTGGGACTACAG30.11363636363636363No Hit
GGCTTCTCTAATTCCATTGTTTTTTTTAGATTCTCTCGGGCCTAGCCGTC30.11363636363636363No Hit
GGCCACAGAGGCGGGGCAGAAAGCCATGGACCAGCTGGCCAAGACCACCC30.11363636363636363No Hit
ACCCTATATTCCGTGCTTCCCATGCAGTCCCCTAAGCAGACTCAGCTACC30.11363636363636363No Hit
TCACCTGAGGTCGGGAGTTCGAGACCAGCCTGACCATGGAGAAACCCTGT30.11363636363636363No Hit
CATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCATGAACGAGGAAT30.11363636363636363No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA30.11363636363636363No Hit
TTCTTAGATTCAGCCGCCGAAGCCATACAGAGTGCGCCCCTGACGTTTCA30.11363636363636363No Hit
GAGTACATGGGACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCA30.11363636363636363No Hit
TTGTAGATCAAAGCCAAGGCCCCCAGGAAGGTGACATACTCCTGGAAGTT30.11363636363636363No Hit
GTATCAACGCAGAGTACATGGGATGCCAAGGCGGCGGCAGAGCTGGTCTT30.11363636363636363No Hit
GTCTTCTGCTTCTTGGTATCGACATCGTCATCCTCATCATCTTCAGCTGC30.11363636363636363No Hit
GTACATGGGACTGACGTCTTCCGGAAACGTGCACTTGCAAGCTGCCCGCA30.11363636363636363No Hit
GCTCATGCCTGTAATCTCAGCACTTTGAGAGGTTGAGGTGGGTGCATCAC30.11363636363636363No Hit
ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA30.11363636363636363No Hit
GGTATCAACGCAGAGTACATGGGAAGATCTTGCCACTGAACTCCAGTCTG30.11363636363636363No Hit
CTGTTCTGCGGCTTCCTTGGCTCTTTTTGCTCGTATGCCGAAGAGCCGGG30.11363636363636363No Hit
GGTTAACCAGGTCCTAAATTCAAGGGATTTCCACGTGTTCTTTAAAACCA30.11363636363636363No Hit
GTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTT30.11363636363636363No Hit
GTACATGGGGTGCGCGACCTGCACACCGGCACCGACGCCGCGCGGCTGAT30.11363636363636363No Hit
CTCTTCTCCTCCAGCGCCGCCTCCAGCGCGGCCGGCGCCTCGCCGCCGTC30.11363636363636363No Hit
CCGAGGAGGTGGTGGCTGCCCGGAGATCAGGGCCAGGCTGTGCTAGATGG30.11363636363636363No Hit
GGCTGTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTG30.11363636363636363No Hit
GTTCTGGAGGATTGACTGCTGCCGAGGCTTGCTGCTTTTTTCTCATCTGA30.11363636363636363No Hit
CTTTTACATTCACTGTTTCTTCAGCCGTCATATTGATAGCCTGAGGGCTC30.11363636363636363No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG30.11363636363636363No Hit
CCATGGAGACATCAAGAGGTCATGATTGCAGAAGAGGTGACTGGAATTGA30.11363636363636363No Hit
GGAAGCCGTGTCAGCGGCCGGAGCGGCAGCTCAGCAAGTGGTGGACCAGG30.11363636363636363No Hit
GCCCTTGAGGGCTTCATTGTAGATCAAAGCCAAGGCCCCCAGGAAGGTGA30.11363636363636363No Hit
GGCCCATGGTCAGCACAGCGGGTGGGTGGGTTTCAGCGTGGTCACTTCTC30.11363636363636363No Hit
GTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCTGGGAG30.11363636363636363No Hit
CCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGT30.11363636363636363No Hit
CACAAGAAGGTGGCCCGGACCATCGGCATTTCTGTGGATCCGAGGAGGCG30.11363636363636363No Hit
CACTAAACCATCCAATCGGTAGTAGCGACGGGCGGTGTGTACAAAGGGCA30.11363636363636363No Hit
CTCCAGGTGGCCAGACGGGAGTTCCAGACCAGTGTTGTCTCCCGGGACAT30.11363636363636363No Hit
CTGCAGCTGAATGAGTTGTGGCGCCCACAATGCTCCCATGACAAGGAGCT30.11363636363636363No Hit
GTACATGGGAGGTGTGGTGGCATATCCCTGTAATCCCAGCTACTCAGGAG30.11363636363636363No Hit
GTAATATTTATTGTGAGATATACATTTGGTCTTCATCCCATTTCCTGGCA30.11363636363636363No Hit
GTACATGGGGATTCTGGGGAGCCGAGCGCGCGGCGCGAGCGTCACGCCAG30.11363636363636363No Hit
CATTTGGCCGCCTCCCTACCGCTCCAAGCCCAGCCCTCAGCCATGGCATG30.11363636363636363No Hit
TCAACGCAGAGTACATGGGAGTCGGACTGCGACACAGCCCATCCCCTCGA30.11363636363636363No Hit
GTACATGGGGACGCATGCGCATAGCTAACCGCACCCGGTTCAGCTCGCCT30.11363636363636363No Hit
CTTCCTCTTCTTCGTCTACCTCATTGTCAGCCTCCTACTCCCCATTTTCC30.11363636363636363No Hit
CCCGGAGATCAGGGCCAGGCTGTGCTAGATGGCGCCTGGAAGGGGGGTCA30.11363636363636363No Hit
GAGGGGGCAGACCGAGGAGGTGGTGGCTGCCCGGAGATCAGGGCCAGGCT30.11363636363636363No Hit
CCCATGAGCATGTCAGTGAAAAAAACCAGTGAATCGCCTTCCAAACCAGG30.11363636363636363No Hit
GGCTAGAGTGCAATGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCA30.11363636363636363No Hit
ATCTAATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAA30.11363636363636363No Hit
CCCGTTAGCAGGGGCGTCTCTTCCATTTTCTGCCTCTTCCACAACTTCCT30.11363636363636363No Hit
GACATACTCCTGGAAGTTCACCTCCTGGTCCTTGTTCCGGTCCAAGTCTT30.11363636363636363No Hit
AGCCAAGGGAGTACAAGCTGTAGACAGTGCCGCCCAGACACAGCGTCATT30.11363636363636363No Hit
GGCAAGATCGTCGGCAACAAGTGGGAGGCTTACCTGGGGCTGCTGCAGGC30.11363636363636363No Hit
GCATAGGAGAAGAGCTGCTGCTTGAGAGACGGGTTCCTGGCATAGCCAAT30.11363636363636363No Hit
CTTTATCGCCAGAGTCCCTGAACTCTCGCTTTCTTTTTAATCCCCTGCAT30.11363636363636363No Hit
GTTCACTGCAGTCTTGACCTTTTGGGCTCAAGTGATCCTCCCACCTCAGC30.11363636363636363No Hit
TCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTCCTCCGCCGCCGCGG30.11363636363636363No Hit
CTCCAAACTCATCCTCTTCCCCAGGAAGCCCTCGGCCCCCAAGAAGGGAG30.11363636363636363No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA30.11363636363636363No Hit
CCTCTTCTCTGCGTCGCAGGCCGGCCCGGCGGCCGTGACAATGTCGCGGG30.11363636363636363No Hit
CTATAATATCCCGGGGCAAACCGGAGAATTTGGCAGTCCGATTGGGGGGG30.11363636363636363No Hit
AGACGGAGTCTCGCTCTGTTGCCCAGGTTGGAGTGCAGTGGCGCGATCTC30.11363636363636363No Hit
TCCTCCTGTAGGCTGGCAGAGGACAGTGGAGCAGCCAACACACAAAACTA30.11363636363636363No Hit

[WARN]Adapter Content

Adapter graph