FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003665976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003665976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2640
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT90.3409090909090909No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90.3409090909090909No Hit
TATCAACGCAGAGTACATGGGGAGAGGAGGCTGCAACGCCGAGCGGAGGA80.30303030303030304No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA70.2651515151515152No Hit
GGCTTGCAGGACCTGAAGCAACAGGTGGAGGGGACCGCCCAGGAAGCCGT70.2651515151515152No Hit
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG60.22727272727272727No Hit
ATACCTGGCTAATTTTTTGTATTTTCAGTAGAGACGGTGTTTCACCGTGT60.22727272727272727No Hit
GCCCAGGAAGCCGTGTCAGCGGCCGGAGCGGCAGCTCAGCAAGTGGTGGA60.22727272727272727No Hit
CCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGT60.22727272727272727No Hit
GTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGA60.22727272727272727No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.22727272727272727No Hit
CAGCTGCACTTGTCCGACGCCCCTTTGCAGATGCAGCCCTGGGCACACTT50.1893939393939394No Hit
GTACATGGGATCTCTCTCGGGTGGAGTCTTCTGACAGCTGGTGCGCCTGC40.15151515151515152No Hit
CTCTCGGGTGGAGTCTTCTGACAGCTGGTGCGCCTGCCCGGGAACATCCT40.15151515151515152No Hit
TTTCTGTGGATCCGAGGAGGCGGAACAAGTCCACGGAGTCCCTGCAGGCC40.15151515151515152No Hit
TCGGAGGGGCGGATGCAGAGCCCAGGGCCCCCACCGGAAGATGTGTACAG40.15151515151515152No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.15151515151515152No Hit
ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA40.15151515151515152No Hit
GTACATGGGGTGCGCGACCTGCACACCGGCACCGACGCCGCGCGGCTGAT40.15151515151515152No Hit
GTGTGTACAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACT40.15151515151515152No Hit
CTCCTGGAAGGTCCCGAGCGCGACACCATGTCGGAGCCCGGGGGCGGCGG40.15151515151515152No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTG40.15151515151515152No Hit
ACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCG40.15151515151515152No Hit
CCTTGGTGGTGATTTCGGAGCTGGTGTCTACGGCTGCGTCTGACATGGTG40.15151515151515152No Hit
TCTTTGCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGC40.15151515151515152No Hit
GTATCAACGCAGAGTACATGGGGAGTCTGCGGTGGGCTAGCGGACGGTCC40.15151515151515152No Hit
GGCTAGAGTGCAATGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCA40.15151515151515152No Hit
TGCAGAATGTGGCGGACGTGTCGGTGCTGCAGAAGCACCTGCGCAAGCTG40.15151515151515152No Hit
TCCCCAGGAAGCCCTCGGCCCCCAAGAAGGGAGACAGTTCTGCTGAAGAA40.15151515151515152No Hit
CAACGCAGAGTACATGGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGCT40.15151515151515152No Hit
CCTTCATCCCTCTCCAGAAGAGGAGAAGAGGAAACACAAGAAGAAACGCC40.15151515151515152No Hit
GGCTGGGTGCAGTGGCTCACGCCTGTAACTCCAGCACTTTGGGAGGCCAA40.15151515151515152No Hit
TTATTCATTTCTCCAGCTCTGATCCGCTGTTGTACCAGGGGTCTAATCAG30.11363636363636363No Hit
GTACATGGGACTCTGGGCAGGATCCAACGTCGCTCCAGCTGCTCTTGACG30.11363636363636363No Hit
GAAAGGAACTTGCGCATCTGCTCCAGGGCGCTCTTCTCCTCCAGCGCCGC30.11363636363636363No Hit
CGCTGCTTCACTTGTGGCAAGATCGTCGGCAACAAGTGGGAGGCTTACCT30.11363636363636363No Hit
GTCTAGTCATCCTCGTCGGTCTTCTGCTTCTTGGTATCGACATCGTCATC30.11363636363636363No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA30.11363636363636363No Hit
GGTGGAGGGGACCGCCCAGGAAGCCGTGTCAGCGGCCGGAGCGGCAGCTC30.11363636363636363No Hit
GAGTACATGGGCCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGC30.11363636363636363No Hit
GTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAA30.11363636363636363No Hit
ACCTTGGCTGGTGTGAGGACTGGAGCTGCTGCCTGGTACAGGGTGGAGGA30.11363636363636363No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT30.11363636363636363No Hit
ACACATCTGAGCCAGCCAAGGAGGAGGATGATTACGACGTGATGCAGGAC30.11363636363636363No Hit
CCACCAGCACCGTGTGGACCTGCGGGTCCGAAAGGAACTTGCGCATCTGC30.11363636363636363No Hit
TTACTGGATGGTTCCTTCCAGAGTGGGGTATGGGATACACACACACTGCG30.11363636363636363No Hit
TGCTCAGGGTGTGCTTGTCACCCTCCCTGCCGGAGTACTTGTGGAAGATG30.11363636363636363No Hit
GTATCAACGCAGAGTACATGGGGGAGAAGGGAGGTGACTCCGGCGGAAGA30.11363636363636363No Hit
GGTGGTGGCTGCCCGGAGATCAGGGCCAGGCTGTGCTAGATGGCGCCTGG30.11363636363636363No Hit
GGAGAAGAACACCCTGCCGACCAAAGAGACCATTGAGCAGGAGAAGCGGA30.11363636363636363No Hit
GTTTTCGGTAAGCCTTTTTAATATCTTCATCTGAAGCTCCTTTCTCAATT30.11363636363636363No Hit
CGTCTGACATGGTGGGGCACGCCGGTGATCCGATGCAGGGGATTAAAAAG30.11363636363636363No Hit
GAGTCCCTGAACTCTCGCTTTCTTTTTAATCCCCTGCATCGGATCACCGG30.11363636363636363No Hit
GCTCTTGACGACTCCACAGATACCCCGAAGCCATGGCAAGCAAGGGCTTG30.11363636363636363No Hit
ATCTTGCCACTGAACTCCAGTCTGAGCAACAGAGTAAGACTCCGTCTCAA30.11363636363636363No Hit
GTATCAACGCAGAGTACATGGGAGGATCCAACGTCGCTCCAGCTGCTCTT30.11363636363636363No Hit
GTGTCCTGCTCCATCGCCCAGGCTGGAGTGCAGTGGCAATCTCAGCTCAC30.11363636363636363No Hit
TTAGCATTCCCGTTAGCAGGGGCGTCTCTTCCATTTTCTGCCTCTTCCAC30.11363636363636363No Hit
CTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCT30.11363636363636363No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT30.11363636363636363No Hit
ATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA30.11363636363636363No Hit
GACCTGGACGAGGCGGGAGACAGCACCGGGCTCTTGATGGACTTGGCAGC30.11363636363636363No Hit
GGCCCAGGCCGCGGAACCGCCCAGCCCGAATATCGGGTTCCAAGGACGGC30.11363636363636363No Hit
CCTCATTAGCATTCCCGTTAGCAGGGGCGTCTCTTCCATTTTCTGCCTCT30.11363636363636363No Hit
GTGGTGTACTCCGTGCCATCATGTCCGTCCTGACGCCGCTGCTGCTGCGG30.11363636363636363No Hit
GTCTACCTCATTGTCAGCCTCCTGCTCCCCATTTTCCTCATTAGCATTCC30.11363636363636363No Hit
TCCACTGAGGCTCCTGATTCTTTATCAGGTTCCTGTTCCCCTGCAGAAGG30.11363636363636363No Hit
ACCCAAGTCTCCCTGCTGTCATTTCAGGAGGCCGACCCAAGTCTCCCTGC30.11363636363636363No Hit
GTATCAACGCAGAGTACATGGGTGGCCAGGTGCGGTGGCTCGTGCCTGTA30.11363636363636363No Hit
CCAGGAAACCATCGACAAGACTGCTAACCAGGCCTCTGACACCTTCTCTG30.11363636363636363No Hit
GAGGAAGAGGAGGAGGAGGAGGTGGACCTGGCTTGCACACCCACCGACGT30.11363636363636363No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.11363636363636363No Hit
GAGTACATGGGAGTCGGACTGCGACACAGCCCATCCCCTCGACCGCTCGC30.11363636363636363No Hit
CCCCTCGACCGCTCGCGTCGCATTTGGCCGCCTCCCTACCGCTCCAAGCC30.11363636363636363No Hit
GTACATGGGACGCTCTAAGCTCGGCAATCGCTCTTGCCGTGCGAGATGCT30.11363636363636363No Hit
GAGTACATGGGACTCTCCGCGGCGCATTCCGGGAGGCAGCGGCCGCAGCG30.11363636363636363No Hit
GTCGTCACAGTCTAGCTGGCAGCAAGCAAGGCAAAAGCAGAGACTGCTCT30.11363636363636363No Hit
TATCAACGCAGAGTACATGGGTGGCCAGGTGCGGTGGCTCGTGCCTGTAA30.11363636363636363No Hit
ACCCGGAGCCGTGCCCAGTCCACGCCGGCCGTGCCCGGCGGCCTTAAGAA30.11363636363636363No Hit
TTTTTAGGGTGGGAACGTGAATTTTAATGAGGGGGCAGACCGAGGAGGTG30.11363636363636363No Hit
CACCATGTCAGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAAGG30.11363636363636363No Hit
GATCAGGGCCTGGCTGTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAG30.11363636363636363No Hit
CTTGATGGACTTGGCAGCCAATGAAAAGGCCGTTCATGCAGACTTTTTTA30.11363636363636363No Hit
GCGTGAGCTCGCCCGCCAGAAGAATATGAAAAAGCAGAGCGACTCGGTTA30.11363636363636363No Hit
GATAGGAATCATGTCTGGTCGCGGCAAAGGCGGAAAAGGCTTGGGGAAGG30.11363636363636363No Hit
GCGTTGATTAAGTCCCTGTCCTTTGTACACACCGCCCGTCGCTACTACCG30.11363636363636363No Hit
ATCATGGCTTGTGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGA30.11363636363636363No Hit
TATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAA30.11363636363636363No Hit
AAAGAGATGAGGGGGGTACAAGTGAGAGGCTGGTGGGGCGACTTGTAACA30.11363636363636363No Hit
TCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGG30.11363636363636363No Hit
GTGCATACGTCGGGGTCCTTGAGGGCCTCGCTGGTCACTGCACCTTTTCC30.11363636363636363No Hit
GCTTTATTAACTAACACAAAGGAAGTCTGGGCAATGTTGCGAGACCCCGT30.11363636363636363No Hit
GCTCCAGGCACACAGGCGAAGGGCAAGAGGGTTGGACACGAAGCCACAAA30.11363636363636363No Hit
AGATGAAGCTTATTTTAGGATCACAAGTGCACGCTCTGGTAGACGGAGGA30.11363636363636363No Hit
GGCAGAGCGGGTGTCAGACTGAGGATTTCGCTTCCCCTCCAAGACGCTGG30.11363636363636363No Hit
GTCACCGGCGGCGCAGGAGCAGTTGGGATCCATGGCGAGCTGAAGAGGCG30.11363636363636363No Hit
GCCATCTTTGCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCT30.11363636363636363No Hit
CCTCCGCCGCGCGCCTCCTCCGCCGCCGCGGACTCCGGCAGCTTTATCGC30.11363636363636363No Hit
TCGCATTGTTACAGAAAGTCACCTTCCTGTAAAAAAGGTACAAAACCTAT30.11363636363636363No Hit
TGCAAAGAGTGCAAATGCACCTCCTGCAAGAAAAGCTGCTGCTCCTGCTG30.11363636363636363No Hit
GTACATGGGTGGCCAGGTGCGGTGGCTCGTGCCTGTAATCCCAGCACTTT30.11363636363636363No Hit
GCCTCAGACAGGGCAAAGCCAAGAATGGCATAGGAGAAGAGCTGCTGCTT30.11363636363636363No Hit
ATCCAACGTCGCTCCAGCTGCTCTTGACGACTCCACAGATACCCCGAAGC30.11363636363636363No Hit
ATCAACGCAGAGTACATGGGACTGGCTGCTCTGAAAAGCCATCTTTGCAT30.11363636363636363No Hit
ACTTTGGGAGGCTGAAGCGGGCGGATCACCTGAGGTCGGGAGTTCGAGAC30.11363636363636363No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG30.11363636363636363No Hit
GTTCTGGGCCGTGACCATCGCCGCAGTGGTCGGCCTCGCCATGATGGCGA30.11363636363636363No Hit
CCATTGGCCTCCTCGTGGCCATCTTCCACAAGTACTCCGGCAGGGAGGGT30.11363636363636363No Hit
ATCCTCATCATCTTCAGCTGCCCGCTTGCCCGTAGCTGACTCAGCTTCCT30.11363636363636363No Hit
CATTTCAGGAGGCCGAATTTTTTCCCAATCCCAGAGAAGGTGTCAGAGGC30.11363636363636363No Hit

[WARN]Adapter Content

Adapter graph