FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003666054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACTGATGAGTGGATTAAAAAAATGTGGTATACATCATGGAATACTATT38.571428571428571No Hit
AGTTAACAGTGAGGTTCCGCTCCTGGATGATCTCCTGCAGGGCATCTGCA25.714285714285714No Hit
GTCAAATATTTGGCGACCAGATTGAGGCGGAAGATGTCCAGCGACAGCGG25.714285714285714No Hit
GTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACT25.714285714285714No Hit
CATCTCTTCATTGATGATCCTGTCCTGTTTATTCATCCTCTAGGAGGTTA12.857142857142857No Hit
GTCCTCATCGTCGTGGTGATTGTGGGAGCCCTGCTCATGGGTCTCCACAT12.857142857142857No Hit
AGGCTCAGTGGCTCATGCCTATATAATCCCAGTACTTTGAGAAGCTGAGG12.857142857142857No Hit
GCATCGTCATGCCGCGGTGGCCAGGCCCTTGGCCGCAATCTCGTCGGCCA12.857142857142857No Hit
AATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTT12.857142857142857No Hit
CCCTACCACCATGCACTGAAGATCTCCCCCTCCTTGCCCTCCATAGCATC12.857142857142857No Hit
GTGTGGCGAGGTGCCGCTCTACTACATCTAGGACGCCTCCGGTGAGCAGG12.857142857142857No Hit
CCTTAAGACTCGATACTTTGACCAGTCTCATGGAAGTCTCGACTCCACTT12.857142857142857No Hit
CCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCG12.857142857142857No Hit
TCCGGGAGCAGGTGCTCAGCAGCCTCGATTGAGGAGAGGGGCGCTTCGGG12.857142857142857No Hit
ACTTATATTAGCGGTAACGGTGGAGCTGGAGAGTATTGCGCCTTCTCCAA12.857142857142857No Hit
CCTGCAGAGAGCATTCCATCTGGAAGTTGTGGACTTTTCTAGTGAGAGCC12.857142857142857No Hit
GGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTC12.857142857142857No Hit
TTGATTGGCTCATCTGATCCGTCGGCATCATTCTGGAGAAATGTACTCAA12.857142857142857No Hit
GAGCATTGGGGCGCCGGAAGCCCAGCAACGCCTGGCCCTGAGTGAGCACC12.857142857142857No Hit
TTCCAGGCCACAAGACAGTAGTGATGCTCTGAAATGAAAGTTTGTCTTCA12.857142857142857No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTAAAGAAATTTA12.857142857142857No Hit
GGCACGTGATAATTTTAATGAAATATCTGGGTGAATGGATTAATGAAAGG12.857142857142857No Hit
GCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTCTGCAAAAG12.857142857142857No Hit
GGCCGGGTCCGCCGACTCGTCGTCAGTCAGCGGGAAGCATGGCGCCACCT12.857142857142857No Hit
GGTGAAGATGTCCAACTACGTGAACGACATGTGGCCGGGCTCGCCGCAGG12.857142857142857No Hit
GCGCGACACCGAGCGCGCCCGTCACGCCGAAGCCGCGCTCGGTGTCGCGC12.857142857142857No Hit
GCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGAGCCTGCATCTCGCC12.857142857142857No Hit
TCTGGCGACTCTCATGGTTGCCCCGGATCAGTGTGATGCGATCAGGATAG12.857142857142857No Hit
ACGCTCGTCATCAAAATCACTCGCATCAACCAAACCGTTATTCATTCGTG12.857142857142857No Hit
GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGA12.857142857142857No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)