FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003666069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length140
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTAAACAACAACTGGAACAATCAAATCAGCAATTAGATGCCAGAGTTC15.88235294117647No Hit
TGTTTCCACCCTGATGTTTCTTATGCTGTTCACGTAAGCGTTCTTCCAGC15.88235294117647No Hit
CCTATTTGATGTCCTTGACGCTGTAGCATATCTCGTATCATTCGACTGCC15.88235294117647No Hit
ACAGGCAATTTCGCATTGGGCGAAACAAATTGCAGATCTACACAATGCTG15.88235294117647No Hit
GGCTGGAGTGCAATGGCGCAATCTTGGTGCACTACAACTTCTACCACCCA15.88235294117647No Hit
CTCATAGCCCAAGCCCTTTAGATTCTTTTTAATCTCACTTTCCAAGACAG15.88235294117647No Hit
CTCATAGCCCAAGCCCTTTAGATTCTTTTTAAACTCACTTTCCAAGACAG15.88235294117647No Hit
AAATTTGAAGATCCTGTATCGATACTCAACCTACTGAAAAAATCAATGTA15.88235294117647No Hit
GTAATGGAATCCTGATATGAGCGACAGCTTTCTTCTCTGGCACAGGTGGT15.88235294117647No Hit
GAGAAGCGAAGCTTCGTAAGAAAAGCATTTGTCCTCCGCAAAATCTGTTT15.88235294117647No Hit
ATTATTTCTAGTTTGCTCACGCTCGACTTGTCGCTCACGCTCAGCTTGTC15.88235294117647No Hit
GTTCAGGTGATCCACTCGCATTTGTTTCTCGTTGATGGTCATATTGAGTG15.88235294117647No Hit
CAGTGTGTTGGGGGCATGTATGTTTATGCCAAGTCTGAAATTTTTAGAAC15.88235294117647No Hit
GCCTCCGACGGCTTGAGTGACCTCCATGGCAAAAGGGGTAGAGATAGAGC15.88235294117647No Hit
GTTATGCCCTTTATTTTGGGCATTCATTTTGAAACCTTATACCTATACTA15.88235294117647No Hit
AAATAGATCCAACTGGGGTTGCGAATATATACCAGTTTGATTCTTTGATG15.88235294117647No Hit
CCTTAGTTTCACCCAAAGACTGACGTTGTAATAACGCAACCATTTCTTCT15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)