FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003666231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCTGAAGAGTCAAGACATTAAAAATAAAAAGCAATTGAACCGGGTAGC43.8461538461538463No Hit
ACTAGAAGTGTGAAAACGTAGGCTTGGATTAAGGCGACAGCGATTTCTAG21.9230769230769231No Hit
AAGCCGCTGGGGAGCACAGTGCCCTGGCCTACGTTTTTTTTTTTTTTTTT21.9230769230769231No Hit
GAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTGG21.9230769230769231No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTGGTTGTGGTTTAT21.9230769230769231No Hit
GTACATGGGAAGCAGTGGTATCAAACGCAAAAAAAAAAAAAAAAAAAAAA21.9230769230769231No Hit
CTCTGGACATAGACCTCACTAACTTTGTATCCCTGCCCCGAGGGCCTCAT21.9230769230769231No Hit
AGCCCAGTCCGCGGCCCCAGCAGCAGCGCCGAGAGCAGCCCCAGTAGCAG21.9230769230769231No Hit
GCTGGACTGGGTGGAACCAGAACAGGCTAAGGCATACAGTTCTTGACTTT21.9230769230769231No Hit
TTATTTCCTCAGAGTCTTCCTTAATCCTATGGAACAAGAAGCTGCCACTT21.9230769230769231No Hit
CGCAGAGTACATGGGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAA21.9230769230769231No Hit
ACTCAGAGACGGAACCAGAGACAGGCCAGAGCATCCCCCTCCTCCACCAT21.9230769230769231No Hit
GTAGAGATCTGCCCGAGCTTTCAGCGTGTCATCGAAACCCTCCTCATGGA21.9230769230769231No Hit
GGTATCAACGCAGAGTACATGGGAGCCCACCAGACTCAGAGACGGAACCA10.9615384615384616No Hit
ACACTGTCTCATGCTGATCAGAAGCCGGGCAGTTCTGTATGTCTTTCAGA10.9615384615384616No Hit
CTGCCTCCCTCATGTCTTGATCAGGGCTGAAAAGTTCCATGGCAGCCTCA10.9615384615384616No Hit
CTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCAT10.9615384615384616No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTG10.9615384615384616No Hit
CTTCTGCAGAGATCTGCCCGAGCTTTCAGCGTGTCATCGAAACCCTCCTC10.9615384615384616No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT10.9615384615384616Clontech Universal Primer Mix Long (96% over 26bp)
GGTGGACACCCTCCCCCAAAAGCCCAGAGAAAGCATCATTAAGCTCATGG10.9615384615384616No Hit
ATCCAACTACGAGCTTTTTAACTGCAGCAACTTTAATATACGCTATTGGA10.9615384615384616No Hit
TTTTTTAACAAACCCTGTTCTTGGGTGGGTGTGGGTATAATACTAAGTTG10.9615384615384616No Hit
GCTTTCAGCGTGTCATCGAAACCCTCCTCATGGACACACCCTCCAGTTAT10.9615384615384616No Hit
ATTTTTTCCATGAGCTTAATGATGTTTTCTCTGGGCTTTTGGGGGAGGGT10.9615384615384616No Hit
CCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAAC10.9615384615384616No Hit
TGATGGTAGAGCTCCTCAATCCAGGCCTGAGAGAAGACCATCAGCACGCC10.9615384615384616No Hit
TCATAGTGAAGACCTAGGAAAGGACGTTGAATTTGAAGTTGTTGGTGATG10.9615384615384616No Hit
AGTAAGAGACGGTGCTTTCTGCACTCAGCTTGAAGGTTTTCTACTCTAGC10.9615384615384616No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTT10.9615384615384616No Hit
AGTCAGCTCCTTGGTTCTCCCGTAGAGGGTGATCTTGAAGTACTCCCTGT10.9615384615384616No Hit
AACATACAGTGTACAGAAATATGCTACATTTTGATGACACAGGCCAGGTG10.9615384615384616No Hit
GCTTAATGATGCTTTCTCTGGGCTTTTGGGGGAGGGTGTCCACCAGCTTC10.9615384615384616No Hit
ACCTGCTGCCGCCCGCGCCATGGCTGGCAAAGCACACAGGCTGAGCGCTG10.9615384615384616No Hit
GTCTCGCTTCTTCCTCTTCTCATCCACCTGAGAAAAAAGCTCGTCCATGT10.9615384615384616No Hit
ATCTCGGTGGTCGCCGATCATCCCATGTACTCTGCGTTGATACCTGTCTC10.9615384615384616No Hit
CTGCAGAAGCGGAGCTGCAGCAGAGAGCCAGTGTGACCAGGGTCCCATGT10.9615384615384616No Hit
AAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAG10.9615384615384616No Hit
GGTGCAAGCCGCGTTCGACGACGCGTTCAAGGCGGGGGCCGACCGCGAGC10.9615384615384616No Hit
GGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTGAAGCAGTTGGGAATC10.9615384615384616No Hit
CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC10.9615384615384616No Hit
TCACCGGACTTCGTTAGCCCGAATCGGCAAGTGCGCGCGCGATGGCCTGG10.9615384615384616No Hit
TTATGAGGCTGCCATGGAACTTTTCAGCCCTGATCAAGACATGAGGGAGG10.9615384615384616No Hit
GCTCGCCCACTGCCCCATCATACATTTCAAAACAAAAAGATTTATCTGCT10.9615384615384616No Hit
GGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAG10.9615384615384616No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC10.9615384615384616No Hit
GTTGAAACCTTAAAAGGGGAAACTTAGACACCCCCCCTCAAGCGCAGGAC10.9615384615384616No Hit
AGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCAC10.9615384615384616No Hit
GCTGGCCCACTGCCCCATCATACATTTCAAAACAAAAAGATTTATCTGCT10.9615384615384616No Hit
GACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGATTTAAC10.9615384615384616No Hit
GTGTGGTACAGATCATAGCGTGTTATCATCCAGACCTGAGCAGACGCGAC10.9615384615384616No Hit
GAAGGGAAGTAACGTCAGCCTGAGAACTGAGTAGCTGTACTGTGTGGCGC10.9615384615384616No Hit
TGCACCACCTGCCCTTCCAGCTGGGCGGCAGGGACGGCGTCGTCGCGGCC10.9615384615384616No Hit
GGCTAGGTCGGTTCTCTCCTTTCCAGTCGGAGACCTCTGCCGCAAACATG10.9615384615384616No Hit
GCTAACAGGTGGTGGGGGTGCCCAAGTAGACAGGGCTGCAGAACAACAAG10.9615384615384616No Hit
GTTTCTTTGTCTGCATCAGTGAATTTTTCCATGTCTTCATCATCATTTGC10.9615384615384616No Hit
GCAGGACTCCAGAGCCTCCTCCATATGGCAGGAATCAAGCTTTCACAGGG10.9615384615384616No Hit
GGGAAGACGATGTGGTTTTCAGGGAGGCCCAGAGATTTGGAGAAGCGGAT10.9615384615384616No Hit
GATCTGCCCGAGCTTTCAGCGTGTCATCGAAACCCTCCTCATGGACACAC10.9615384615384616No Hit
TCTCAACCTGCGCTGAAGATGCCGGGAAAACTCCGTAGTGACGCTGGTTT10.9615384615384616No Hit
ACCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCA10.9615384615384616No Hit
GGACACACCCTCCAGTTATGAGGCTGCCATGGAACTTTTCAGCCCTGATC10.9615384615384616No Hit
TAGCAGATAGGATTTAGGAAATAACTGAACACATGGATGAAAAAGGACTG10.9615384615384616No Hit
TTTACTTGGATGTCAGAGAATGGATGTTAGCAGTGGGGATATCTGTGTGG10.9615384615384616No Hit
ACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAA10.9615384615384616No Hit
TTCCTAAAATGAGAAAAATAAATTGCTTGAGAAAATGAAAGGATACTCTC10.9615384615384616No Hit
CCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGA10.9615384615384616No Hit
ACCAGAGACAGGCCAGAGCATCCCCCTCCTACACCATGAAACTCGCTGTC10.9615384615384616No Hit
TCCCCGTGCCGTGCGCCACACCGTGCGGCAAGTTGCGCAAAATCCAGCTA10.9615384615384616No Hit
GTCCACCAGCTTCTTCAGCTGAGCCCCTGCCTCCCTCATGTCTTGATCAG10.9615384615384616No Hit
TTTCAGCCCTGATCAAGACATGAGGGAGGCAGGGGCTCAGCTGAAGAAGC10.9615384615384616No Hit
CAGAGAGCCAGTGTGACCCTCACCCTGGTCACACTGGCTCTCTGCTGCAG10.9615384615384616No Hit
AAAGAAGGCATGTTTACATGGTGATCTTGTGGAATGTGACTGTGCCGGGG10.9615384615384616No Hit
TTCTTCAGCTGAGCCCCTGCCTCCCTCATGTCTTGATCAGGGCTGAAAAG10.9615384615384616No Hit
ATGTAGTAGTTGGGGTGAAATAGGACTACTTCTATCTCCAGGTCCCGCTT10.9615384615384616No Hit
CATCAAAGCCTTTAGACCTGTTTTAAATGGTTTCTCCTTGGTTCCATCTC10.9615384615384616No Hit
CTCTTTTGTTTCTCCAGCTTTCATAGTAACCGTCCAAGCAAAAGGTTTTG10.9615384615384616No Hit
GTACTGCAACAAGTGAGCATCATTCACTGCAACCTTGAAGTGGTCAGGTT10.9615384615384616No Hit
GGGATCTTCAGCTTCTAAATGCTAATTACACAGTGAGCTTTGGGCTATTT10.9615384615384616No Hit
GAACCAGAGACGGGCCAGAGCATCCCCCTCCTCCACCATGAAACTCGCTG10.9615384615384616No Hit
TCCCAAGGAAGTGAGACAATGAATACATGTTTCTTTTACTTTTGAATCAA10.9615384615384616No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTATGATATGGT10.9615384615384616No Hit
CCACCAGACTCAGAGACGGAACCAGAGACAGGCCAGAGCATCCCCCTCCT10.9615384615384616No Hit
CCCTGGTCACACTGGCTCTCTGCTGCAGCTCCGCTTCTGCAGAGATCTGC10.9615384615384616No Hit
CCATGGAACTTTTCAGCCCTGATCAAGACATGAGGGAGGCAGGGGCTCAG10.9615384615384616No Hit
TAACAGATGACATAAACAAATGGAAAAATATTTCAGGCTCATGGAATAGA10.9615384615384616No Hit
GTACATGGGATACTAGCCCACCAGACTCAGAGACGGAACCAGAGACAGGC10.9615384615384616No Hit
ATTGCATGGTGATAATAAAATGATAGGAAATAGAGGAAAATAGATACAGG10.9615384615384616No Hit
GTGAAAATTGATATGAAAGTACATTGAAAACAAAAAAAAACATGTATAAA10.9615384615384616No Hit

[OK]Adapter Content

Adapter graph