FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003666237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAATATTGTGATAATCCCTGAAGGGTCACCTCACTGCCATCTTTCCCAA28.0No Hit
GGCGAGTTTATGTTTGACTTTGATGGTGATGAGATTTTCCATGTGGATAT28.0No Hit
GGCTTCGCGCACTTCGTGTCGCTGCGCCTACCCCCCTCGCCGGGGGCGAC14.0No Hit
AAATTAAAGGGAAAGTCTTTTATTTAACTTATTCTATTTTTATATCTTTC14.0No Hit
AAATATGCCTTTCCCAAAATGAACACTGTTCCAACTATCATATTAGTTGG14.0No Hit
TCCATGGACCGCATCGAGCTTCTCCAGGTCTTCGTGCGCGTGGCCGAAAC14.0No Hit
GAAGATGGAATTGTGGGATTTTAGAGCTGACAGGACACTTAAATGAGCCA14.0No Hit
AGTCTTTTTTGTAGAATCTGCAAATGTATATTCGGATCGCTTTGAGGCCT14.0No Hit
AAGAACCAGGTCTGCGACGGGAAGGTCTGCAGCTGCTGCTGCTGCTGCTG14.0No Hit
CTCTTTGTATAGCATGTGGAAATGGATATTTGGAGCGCTTTGAGGCCTAT14.0No Hit
TTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTT14.0No Hit
TCTCCATGGTGTATATCTAGAAGCGGAAGCCCTGGATTGGAGCATACATA14.0No Hit
AATATCCTACAAACCAAAAAAAGGCTCCTATTTGTACCTCTGATATAATT14.0No Hit
GCATGGCAGTGAGTCTGTAGTTTCAGCTACTCAGAAGGATTGCTTGAGCC14.0No Hit
CTTCTTTCACTTCTGAGTTTGTTTTCTTTTTTCTTAGTCTATGTAAGAAT14.0No Hit
ATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATA14.0No Hit
GTCCAGGGTAAATAAAAGTCTGTGTGATGGGGAGCAGGTGCTCAGAGAGG14.0No Hit
TCGCTGCGGCCCATGCCGGCATTGGCGACTTCGCGGATCTTCGATGCTTC14.0No Hit
GGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACT14.0No Hit
CTCCTGGCCTTTTTTGTAATTTTTGTAGAGATGAGGTTTCACTATGTTGC14.0No Hit
CACTAAAGGGAAGCATCACCCCTGACCTGTGATCTTGACATTGCAGGCTC14.0No Hit
AATATCCTACAAACCAAAAAAAGGCTCCTAATTGTACCTCTGATATAATT14.0No Hit
CAACTGAAATAAGGCCAGGATGAATGGAGCATAGCCCAGGGAGGAGCCAG14.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)