FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003666238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGATGAAACAGATGAGGACGTTGGGCTCTCTCAGTTCCACAGGGCTGT28.0No Hit
CCTGTATGCAAATAAACTAGAGAATCTAAAGAAACGGATGAATTCCTGGA28.0No Hit
GTTGCCTTTTTTGGTGGGGAGGACGGGGAATGGAGATGGTATTTTTTAAT28.0No Hit
ACACAGCAGGTTCTGAGAATGCTTCCGTCTAGATTTTAAATGAGGATATT14.0No Hit
GGGAGGAACTGCTGCTCCATGTCGTCCATGTCGGCCACCAGCGCGCGAGC14.0No Hit
TGACGGCGCCTTCGGCCGCCTTCGCCTCGGCGCGCGCTCGATCGAAGCAG14.0No Hit
GTGCCGATGCCTTGCCCGTGGCGCGCGCCCTCGAGCAGGCCGACGTCGGC14.0No Hit
CATCCCAAAGAGATATCTCAGAATGCTTCTGTCTTTTTTTTTATGTGAAG14.0No Hit
GTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGT14.0No Hit
ATGAGAAACCATTTCACAACCATCAGACTGGCAAAGGTTTCAAGTCTCTT14.0No Hit
GCAACTTCTGCTTCTCCTATTATAGATTAACTCTCTTCCTCATTGCTCTT14.0No Hit
CCTAATGAGTGTCCAAGCTGGGATTCAAACCCAGGCCTGTCTGATCACCC14.0No Hit
GCGTAGCGATAAACGCCTGGACGCGACCTTTCGCTACAATCACCCCGGTT14.0No Hit
GAGCTGCTCGTGCAGCCCTTTGCAGAGGCATAAATCCGCACCACCCTTGT14.0No Hit
ATCCGCAGCAGCATCAGCCGTTCGGACAACAGCAGGCGCCGCACTATCCG14.0No Hit
AGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGC14.0No Hit
GGGAGAGGCTTAGGTAAATAACAAGGCAGGCTTATTGGGAATATACACCG14.0No Hit
ACCTAATATTATGCCTAAAGGAGCGAGAAAATTAGAGAACAATACAAGCC14.0No Hit
GCTCAAGCAATCCTTCTGAGTAGCTGAAACTACAGACTCACTGCCATGCC14.0No Hit
GAAAGAGGGAATGCATGCTTCTGTGGAATTTCATGTATAGATATTTGTGT14.0No Hit
TTTCAGTGCTAATTTGTAAGATTTTACCAGCTGGACCTTTCTAGAAGTAA14.0No Hit
CCTGTACACTTTTCCTTAAAACTTTTCAGTAGCTTCCCATTTCTAGGGAA14.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)