FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003666273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTGCTAAATATAGATAGGCACTCCCTTTCAATCCAGCAAGCATTCTA28.695652173913043No Hit
ACAATCCAGTGCTGATATCAGATACAAGCTTCAAGGACAATTTCTTTTCG28.695652173913043No Hit
GAATAGTAGAAACAGATCTTAAGATTTGAGTCATGGTAAAACCGGTAATT28.695652173913043No Hit
GCCCCAGGCACTCCGCCGGCTCCGCCCGCGCACCCGGAAAGTCAAGAGCG14.3478260869565215No Hit
CGTTTCTGGAAACTGCCTCGTCATGCGACTTTCCCCGGGGTCAGGGCCGC14.3478260869565215No Hit
GTATGACAGACAGAGTAATGGTCCCCCGAAGATGTCCACGTCCCAATTCC14.3478260869565215No Hit
CTTCCTGCCTCAGCATCCTGAGTAGCTATGGCTACAGGTGCGTGCCCACT14.3478260869565215No Hit
GAAGAGGCCACTTCCAAGGATGCTGGAGAGTCTCTGACCCACAGTTCCCC14.3478260869565215No Hit
ACCCCACACCTCCACCTGAGCACCCCCTTCTCCGGTGCTGGGAACAGATG14.3478260869565215No Hit
GGGCCGGACTCGTCATACTCCTGCTTGCTGATCCACATCTGCTGGAAGGT14.3478260869565215No Hit
ACATTAAGGAGAAGCTGTGCTACGTCGCCCTGGACTTCGAGCAAGAGATG14.3478260869565215No Hit
CATTTGAGAAAGGTGTTTGACAAGTACATGACTATATCAGGATTTCAAAT14.3478260869565215No Hit
ATCATATAATATGTGGTCTTTCGTGACTGGCTTCTTCCACTTGGCGTACG14.3478260869565215No Hit
CAACTGAGGACGTTTACGACTGCAGGGTGGAGCACTGGGGCTTGGATGAG14.3478260869565215No Hit
GTTCTATGTGGATCTGGACAAGAAGGAGACCGTCTGGCATCTGGAGGAGT14.3478260869565215No Hit
CTTGAATTCAGTGTGCACACATACACTGTGCACTATGGGACAGCCTTCAG14.3478260869565215No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG14.3478260869565215No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTAA14.3478260869565215No Hit
GCCCCACACTTCAACAGGAGTGACACCAGGTCAGGATTTTGCAGGTCCAC14.3478260869565215No Hit
GGCCCGGGTGGTTGCTGCCGAAATGGGCAAGTTCATGAAACCTGGGAAGG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)