FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003666299

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666299
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCGGGATGCTGGCTTTTCTGCCATGGATCCTCCTCATTTGACGTTGTG27.6923076923076925No Hit
GGGTCTTTTCCCGACGATGCACGGGCGAGTCACTGCCCCTTCGTGTTGAC27.6923076923076925No Hit
GTTGCTATGAGGGCTCAAGGAGGAGATACATATAAAGCATTTAGAAAGTG27.6923076923076925No Hit
ACACCGAAATACCAAAGCAATTATGGCCACTGGAAACAAAGCCATCTCAA27.6923076923076925No Hit
ATCAATGACCGGCCGCCAAACGTCTTTCATCCGAACGATCAAATAGATGA13.8461538461538463No Hit
GAGGGCAAACATCCGGTCACCCAGTTTGATAAAAGCGACGTTGAATACGC13.8461538461538463No Hit
CTTAAAAAGGTGACATAATGATGGACAGTGACCACCAGGCTTAGAAGGTC13.8461538461538463No Hit
CCTGAGGTGCGACCGGAAGGTCGGGAACCCCTTCCAGACAAAGCAGGGGA13.8461538461538463No Hit
CAGCAGACCCGCAGAGAGCCGGCTGCGCCGGGGCCCGACCCTGCGGGCTG13.8461538461538463No Hit
CCTCTTCCTCGCCCACCACCGCCTGCCCGAGCCGGGGAAGGACACCCAAG13.8461538461538463No Hit
GTACATGGGGACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTC13.8461538461538463No Hit
GGGAAGGGTTGATCGAGCATAGCCCCGACCGCCGCGCCGCCGCGAGCGGA13.8461538461538463No Hit
CAACTGGAAGTCCGGAAGTCAGGGAAGGTGGGCACCACTGGGAGAGCCAT13.8461538461538463No Hit
GTCTTGGCTCTGGGAACATGCTGTTACCACTACCGAGAAGCTCTTAACCC13.8461538461538463No Hit
ATGTCGATCAGCGCATGCTCCAGGATGGAGCGCAGGCCGCGCGCACCGGC13.8461538461538463No Hit
ACTCAAGTGATCCACCTCAGCCTCTCAAAGTGCTGGGATTACAGTCGTGA13.8461538461538463No Hit
CAGCTTGGGAATGCAGCCTGGGGCGCTTCCTTTCCCTTGGAAAGAGCTCT13.8461538461538463No Hit
ATTCTTGATGCGCATGCCCATCAGGGAGTCGAGGCCGAGGTCAATCAGCG13.8461538461538463No Hit
TCCTCCCCCAGACGGAGGCCCACGGTGGAGAGGAGGGCGCTTCCGCCCTG13.8461538461538463No Hit
TATATATACTTTCCCTTATGTAATAAGGAAGGTTTTTATTCGTTCAATAA13.8461538461538463No Hit
CCTCTTCCTCGCCCTCCACCGCCTGCCCGAGCCGGGGAAGGTCACCCAAG13.8461538461538463No Hit
GCTTATGATATCCGTGGTCCTGTTTTGGAAGAAGCCATGCGGATGCGAGC13.8461538461538463No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)