FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003666300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length140
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAAGGTGGGAGG27.6923076923076925No Hit
CCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGG27.6923076923076925No Hit
ATCTACCGGTACGAAAAGTACGTGGTCGGCGAGCACTGCAAGAAGCAGAA27.6923076923076925No Hit
GGCTGAGGCTGCAGTGAGCTGTGTTCATGCCACTGCACTCCAGCCTGGGT27.6923076923076925No Hit
TCGCGCAGTCCAACCTGGGCGTCGCACCCGTCGCCGCCCCGGCCGCCGAC13.8461538461538463No Hit
GGCCACGCTGGACGAGCTGGACGAGGCCACGCTGGTCCGAATCCTCACCG13.8461538461538463No Hit
GGCAGAACCATGTTCTGCAAGAGCCTGGGCCTTGCCTGTTGGGAAGACAG13.8461538461538463No Hit
GAAGAGGGCGGCCCGGGCGGCCTCTTCCCCCAGGAGGTCTAGGCTTCCCG13.8461538461538463No Hit
AGGCGGTGCCAGTGAGCTTTCCTCCTATGAGTGGCCCTTTTAAATGGCTC13.8461538461538463No Hit
TCATGAATGACCTCGTCTGGCGCTGTAAAGCCAAATTCTGCTGGATTTCC13.8461538461538463No Hit
TCCCCAGGTGCCCGACACCCCGCCCGGGGCCAGCATTTTTCGCTTCCTAG13.8461538461538463No Hit
CCCCGTCCCCTACCTCCAGGTGGCCGACGGCCGCCAGGCCCTCGCCCTCC13.8461538461538463No Hit
GGAAGAAGACGGAACGTTGAGTTCTCTTGACGACTTGTTTGACGACCACG13.8461538461538463No Hit
CCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGTTTCTTTGGA13.8461538461538463No Hit
GCAAAGAGTGGGGTTAAGAGCTTCTCGGTAGTGGTAACAGCATGTTCCCA13.8461538461538463No Hit
GCCGGCGGGTGCTTGCAAGCCTGTACTGGGAAGGACGGAGTGAGCTTCCA13.8461538461538463No Hit
GTGTGTGTGCATGTGTCTGCTCTTTGAATTTTCCTTTGGCTGGTTGTAAT13.8461538461538463No Hit
GTCAGGTTGCAGACGCTTGATCAGGTCCTTCATGCCGCGCGATTCAAGCT13.8461538461538463No Hit
TTTCCCGCTACAGCGCCTCAGGAGAAGTCCCACGTTAGGAACTGGAGGTC13.8461538461538463No Hit
GAAGAGGGCGGCCCGGGCGGCCTCTTCCCACAGGAGGTCTAGGCTTCCCG13.8461538461538463No Hit
GTGGATGTGGTTGAAAACCAGCGCTTGCGCGATGACCAACACGATGAACC13.8461538461538463No Hit
GCATTGGCTAATAGCACTGAACTCCATTTTATGCACATTTCTGAAGCCTT13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)