FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003666449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGTAAGATTGAGCATTAATTTTATGTATTTAAAAATCATCTCTATTTCC18.333333333333332No Hit
CAACCCTGCATCTCCTGAGGTAGGAAAGATTCCTGTCTCTTATACACATC18.333333333333332No Hit
GTCTTACATTCAGACATATTATCATTAAGCTATAAAGACAGCCTGTCTCT18.333333333333332No Hit
CTCTTTCACCTATACTGTGCAAACCTGAAAACTGTAAATGCCAAAATACT18.333333333333332No Hit
GGGTTGTAGGGACATGGTGGGGGTGAAGACTCCAGACCCACTTCTCCAGG18.333333333333332No Hit
GGACATCCACCCTGGCATTTGCCCTCCGCCTTGGTTTTTTCCCCTCCAAC18.333333333333332No Hit
CAATTCCACTGCGCTCCACTCCACTCCATTCCAGTCCACTCCACTCCTTT18.333333333333332No Hit
GCCATGACTTGAGGAGTAATTGGTTCCCCACTTGGCTCTGTCGTTGCTTC18.333333333333332No Hit
CATCCAAACAATGGAACCTACCCATTGTGTGGATAACAAATTTAAGATTG18.333333333333332No Hit
AGACGGGGTTTCACAATGTTGCCCAGGATCTGTCTCTTATACACATCTCC18.333333333333332No Hit
TCCTTAGACTGGGGGTTACCCTGATCCTGAGTACACCACTGCTGCTGTCT18.333333333333332No Hit
GTTCAAATTCTGTGCAGTAAGAAGCCTACACCACCGAGACTATGATGTCT18.333333333333332No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)