FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003666529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3536
Sequences flagged as poor quality0
Sequence length140
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCG100.2828054298642534No Hit
ATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCC70.19796380090497737No Hit
CGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCG70.19796380090497737No Hit
CCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGG70.19796380090497737No Hit
GCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGGCCGGGGCCGGGACCCTGG60.16968325791855204No Hit
GCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACT60.16968325791855204No Hit
GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG60.16968325791855204No Hit
CCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCG50.1414027149321267No Hit
GATCTGCCCGAGCTTTCAGCGTGTCATCGAAACCCTCCTCATGGACACAC50.1414027149321267No Hit
CTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTC50.1414027149321267No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC50.1414027149321267No Hit
ACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTT50.1414027149321267No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA50.1414027149321267No Hit
AAGCATGGCAGCGGCAGAGGCTGGAGCAGTTGGGGATCTTCAGCTTCTAA50.1414027149321267No Hit
AAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGT50.1414027149321267No Hit
ATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGC50.1414027149321267No Hit
TGCTTTCTCTGGGCTTTTGGGGGAGGGTGTCCACCAGCTTCTTCAGCTGA50.1414027149321267No Hit
CTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATT40.11312217194570137No Hit
GAGTCAAAGAGCTTCACGACCACCTCAGTGACACCGGAAGGAACGTCCGA40.11312217194570137No Hit
GTGTCCACCAGCTTCTTCAGCTGAGCCCCTGCCTCCCTCATGTCTTGATC40.11312217194570137No Hit
AGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGC40.11312217194570137No Hit
GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT40.11312217194570137No Hit
CTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCATGATTA40.11312217194570137No Hit
CTGCTGCAGCTCCGCTTCTGCAGAGATCTGCCCGAGCTTTCAGCGTGTCA40.11312217194570137No Hit
GGTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATA40.11312217194570137No Hit
CTCCTCCACCATGAAACTCGCTGTCACCCTCACCCTGGTCACACTGGCTC40.11312217194570137No Hit
GGGCTATTTTTTCCATGAGCTTAATGATGCTTTCTCTGGGCTTTTGGGGG40.11312217194570137No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT40.11312217194570137No Hit
ATCAATCTGTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGT40.11312217194570137No Hit
GGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCTCGGCTCAGC40.11312217194570137No Hit
CTTTTGGGGGAGGGTGTCCACCAGCTTCTTCAGCTGAGCCCCTGCCTCCC40.11312217194570137No Hit
GTAATAGCAAGTGACATTAGCCACATTAGGAATGACATTTTGGTCAGCTA40.11312217194570137No Hit
ATTGAACCACTTGGTCACCTTTCCCTGTGAGTCCAACAACTTGGCCCCCA40.11312217194570137No Hit
GTTATGAGGCTGCCATGGAACTTTTCAGCCCTGATCAAGACATGAGGGAG40.11312217194570137No Hit
GGTGTCCACCAGCTTCTTCAGCTGAGCCCCTGCCTCCCTCATGTCTTGAT40.11312217194570137No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)