FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003666995

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003666995
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length146
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATTACGGCCGTTCACAACGCCTGCAAAAAGCGTAGTTTTTTCGTTCAC210.0No Hit
CCTGATAGCGCCCGTGAATTGGCGCGGGCATGGCGAAAATCTCGGGTCCG210.0No Hit
CGTCTAGAAGGGCCTCTGGGGTGTAGCCGAGGAGGGCCTGTCTCTTATAC210.0No Hit
AGGGTTACCTTGCCGTCGGCCGTGGTCTCGTCGTGGCCGATGCCCAGGTG15.0No Hit
GTCGCGGGAAGCTAATTCAGTGGGTACCAATAATGATTTCAGCGCCGGAT15.0No Hit
GCCTTGATCGCCCTGGGTGACAACCATCCGCGCCTGGACGAGGAGCTGAA15.0No Hit
ATCCCGATGAGGAGCACGATGCCGATCATGCCGAGGACGGTCAGGCCTTC15.0No Hit
CCATTTCTTTGAGGTCTTTCTGTGCCATCTGCATCCCGGTTAATCGGTTG15.0No Hit
ACCTTTGTCGGCCAGCTCCTCAAGAACATTGAGGGTGGCAACAAGGATCT15.0No Hit
CCTCCACGTTGATCTCCCACAGCTCGCGGGAACGGGCATCCGGCTCCCCC15.0No Hit
GTTCCGTGGGAATAGGCTCAAGGGGCAAGGTTTAAGGCTGTCTCTTATAC15.0No Hit
GCTGAGATTGTGCAACTGCACTCAAGCCTAGGCAACAAGAGCAAAACTCC15.0No Hit
CTGGTCACGCGCCGGGTCGCACCCCAAGGCGTGGCCGGCTTCGAGACGGC15.0No Hit
ATGTACAGCGAGGAGCGGCTGATCGCCCTGGGATGTGCGCTACTGGGGCA15.0No Hit
TTACTCTTTCTTTGATTTGCCCGAACAAGTACATGTTATAAAGTCCAGCC15.0No Hit
GTTCTGGACCGTGGATCGCGGCCTCTTGAGCGCGGCGCTGGCGCTGATGG15.0No Hit
GCGCAATATGTACCACTCAAACACCACGCGGGTCTTCGACGCCGACATGG15.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)