FastQCFastQC Report
Tue 10 May 2022
EGAF00003667003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22496
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTAATCTCCTGCCCCTGCTCCGGGTACCCCAGGGCTGCCGCCCATCAG730.32450213371266No Hit
GTACATGGGAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGAC690.3067211948790896No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT680.302275960170697No Hit
ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG650.2889402560455192No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG440.19559032716927452No Hit
GGGTATTGTTGATCTTGAGAAGATTTTGTAGAGTGGCAGCAAATCCTGGT440.19559032716927452No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT420.18669985775248932No Hit
GTACATGGGCGAGGCCGCGTTCAACGACTGGGGCTGGCGCGTGCCGTTCC410.18225462304409673No Hit
ACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACG410.18225462304409673No Hit
GAATAATATATGGATTCGAGACCATGAGGATAGCGGGTCTGTACATTTGG390.17336415362731153No Hit
CACACACAGTGGCCAAAAAGAAAGCCTCACTGTGTAATCTCCTGCCCCTG390.17336415362731153No Hit
ATATTATTCTGGTCTGGGAGGCTGAGGCAGGAGGCTGGGTAGTCCTCGAA390.17336415362731153No Hit
CACACACACAGTGGCCAAAAAGAAAGCCTCACTGTGTAATCTCCTGCCCC360.1600284495021337No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC330.1466927453769559No Hit
CCTCAGAGGGCACGTGGCCTCCGCAGGGAACTGGAAGATTGTCATTACTG330.1466927453769559No Hit
ATCATAGGTTGCACCATGCGTCTCCGGGCATTAATGAACCAGTTGTTGAC330.1466927453769559No Hit
GTACATTTGGGGACCCCAGGTCCATCCAGCGGGGGCCTGGCCTCCCAGAG330.1466927453769559No Hit
CTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAG310.1378022759601707No Hit
GTCCACGAGCAGTCCGTTGCCGCCGTTCATCAGCTTCGCGATGCGAACGA310.1378022759601707No Hit
GAACTGGAAGATTGTCATTACTGCCGCAGCATGGAGACCCAGGATGGGAG300.13335704125177808No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC290.1289118065433855No Hit
GTCCACCACCTTGACGATGACCATGTCGGTCTCCTTGTCGACCTCGAACT290.1289118065433855No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT290.1289118065433855No Hit
GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC280.12446657183499288No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG280.12446657183499288No Hit
GTACATGGGCCCCGTGATGGGGCCGGAGCTGGGCTGGGGACACCCCGCGG270.12002133712660029No Hit
TTCCAGGGCAACCCGGTGGCACGCGAGATCGACTTCAAGAGTTCCTGCGA260.11557610241820769No Hit
GTACATGGGCACCAGGGGCTGGCTCTCGGCGTCCTGGAGCTTCGAGAGCA260.11557610241820769No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA260.11557610241820769No Hit
CCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAAC260.11557610241820769No Hit
TCGCTGTGTTGTCCAGGTTGGAGTGCAGGGGCGCAATCTCGGCTCACTGC260.11557610241820769No Hit
GTCCAGGTTGGAGTGCAGGGGCGCAATCTCGGCTCACTGCAACCTCTGCC260.11557610241820769No Hit
TCCTATGCCTTCTTGAATTCGTATCGATGTGGTTGCTGGATTCGAGCCCG260.11557610241820769No Hit
GGCAGAGGGTATTGTTGATCTTGAGAAGATTTTGTAGAGTGGCAGCAAAT250.11113086770981509No Hit
TCCATATATTATTCTGGTCTGGGAGGCTGAGGCAGGAGGCTGGGTAGTCC250.11113086770981509No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA240.10668563300142249No Hit
GTATCAACGCAGAGTACATGGGAGATAACCTCGGGCCGATCGCACGCCCC240.10668563300142249No Hit
CCCCAGGGCTGCCGCCCATCAGGGTAAAGTCCAAGTGGCCAACATGATGC240.10668563300142249No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG240.10668563300142249No Hit
CCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCG240.10668563300142249No Hit
GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT240.10668563300142249No Hit
GTCTATGGGGACAGTGAGTACAGCCAGCTCCTCAGAGGGCACGTGGCCTC230.10224039829302986No Hit
GAATCTCGCTGTGTTGTCCAGGTTGGAGTGCAGGGGCGCAATCTCGGCTC230.10224039829302986No Hit
GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA230.10224039829302986No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT230.10224039829302986No Hit
ATTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCAGAGGGTATTGTT230.10224039829302986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)