FastQCFastQC Report
Tue 10 May 2022
EGAF00003667004

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667004
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22496
Sequences flagged as poor quality0
Sequence length146
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTAATCTCCTGCCCCTGCTCCGGGTACCCCAGGGCTGCCGCCCATCAG840.37339971550497864No Hit
GTCCACGAGCAGTCCGTTGCCGCCGTTCATCAGCTTCGCGATGCGAACGA670.2978307254623044No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT570.2533783783783784No Hit
ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG560.24893314366998576No Hit
ATCATAGGTTGCACCATGCGTCTCCGGGCATTAATGAACCAGTTGTTGAC530.23559743954480794No Hit
GTACATGGGAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGAC450.20003556187766716No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT410.18225462304409673No Hit
GTCCACCACCTTGACGATGACCATGTCGGTCTCCTTGTCGACCTCGAACT400.17780938833570412No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT380.16891891891891891No Hit
ACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACG380.16891891891891891No Hit
GGGTATTGTTGATCTTGAGAAGATTTTGTAGAGTGGCAGCAAATCCTGGT370.1644736842105263No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT360.1600284495021337No Hit
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG340.1511379800853485No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG330.1466927453769559No Hit
ATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTGCCTACCA330.1466927453769559No Hit
GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA330.1466927453769559No Hit
GTCCCCAGGACTCCATCCATGTTGCCACCATCTCTCCCTGGGCATCTGCT330.1466927453769559No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT320.1422475106685633No Hit
CCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCG320.1422475106685633No Hit
GTCCAGGTTGGAGTGCAGGGGCGCAATCTCGGCTCACTGCAACCTCTGCC320.1422475106685633No Hit
CACACACACAGTGGCCAAAAAGAAAGCCTCACTGTGTAATCTCCTGCCCC320.1422475106685633No Hit
GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC310.1378022759601707No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT310.1378022759601707No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA300.13335704125177808No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC300.13335704125177808No Hit
GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT300.13335704125177808No Hit
CCCCAGGACTCCATCCATGTTGCCACCATCTCTCCCTGGGCATCTGCTGT300.13335704125177808No Hit
TCCTATGCCTTCTTGAATTCGTATCGATGTGGTTGCTGGATTCGAGCCCG300.13335704125177808No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA290.1289118065433855No Hit
CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC280.12446657183499288No Hit
CCCCAGGGCTGCCGCCCATCAGGGTAAAGTCCAAGTGGCCAACATGATGC280.12446657183499288No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA270.12002133712660029No Hit
CACACACAGTGGCCAAAAAGAAAGCCTCACTGTGTAATCTCCTGCCCCTG270.12002133712660029No Hit
GTCCGTTGCCGCCGTTCATCAGCTTCGCGATGCGAACGACTTCCTCGTTG270.12002133712660029No Hit
GTATTGTTGATCTTGAGAAGATTTTGTAGAGTGGCAGCAAATCCTGGTTG270.12002133712660029No Hit
GTACATGGGCCCCGTGATGGGGCCGGAGCTGGGCTGGGGACACCCCGCGG260.11557610241820769No Hit
CTCCAAACCCAACCTTGCCAGCTGGCCCAGCTTCACCTCTCTCTGCTCCC250.11113086770981509No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCA250.11113086770981509No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG250.11113086770981509No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG250.11113086770981509No Hit
CCTCAGAGGGCACGTGGCCTCCGCAGGGAACTGGAAGATTGTCATTACTG240.10668563300142249No Hit
CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCTTTGAACAC240.10668563300142249No Hit
CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG240.10668563300142249No Hit
CCTAAACGTTCTTCCTTTTCTATCTAGTCACCTTCCACCCGTTCCACACA230.10224039829302986No Hit
CCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAAC230.10224039829302986No Hit
GAGTACATGGGCACCAGGGGCTGGCTCTCGGCGTCCTGGAGCTTCGAGAG230.10224039829302986No Hit
GGAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCAT230.10224039829302986No Hit
CTCCCTGGGCATCTGCTGTGGCCTCCTAAACGTTCTTCCTTTTCTATCTA230.10224039829302986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)