FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003667091

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667091
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGCTGTTCTCGCTGGCGCTCTGCGCGCCATTCACGGGCGAAGGCAGC33.061224489795918No Hit
GTAGTCACGCCCATCTGTTCCACACCACTCAAGATCACGGCGTGAAAGAT22.0408163265306123No Hit
CAGCTACTCAGGAGGCTGAGGCAGGAGACTCGCTTGAACTAGGGAGGCAG22.0408163265306123No Hit
GTATAAACAGTTTTGCTCTGCTCATGCTTAGGAAAGCCAATTGATTATGT22.0408163265306123No Hit
ACATAGCCAGCCCATCCTCAAACTCCTCCGCAGCCTCTTCACTACCAATC22.0408163265306123No Hit
AGCCAGGTGGCACCCGTGGCCAGCCCCAGCCACGGCGCGATGCCCACCAG22.0408163265306123No Hit
CACTTTATTAAATACTGCAGTAGGAATTAACGTATGTTATCCGAGAACAC22.0408163265306123No Hit
CATCCGACTGAAGTCACAGTTATCCCTGGGAGTAGTGCAACGTCGCAGAC22.0408163265306123No Hit
CTGCAAGCTCTGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCC22.0408163265306123No Hit
ACTGTACCCAATGTGTAGTCTTTTATCCCTCACCACCCCCACACTTTTCT22.0408163265306123No Hit
CAGTTTGGAAATAGAAAGTGCACCTGTAATGTGTTGAGGGTGGGAGGGAG22.0408163265306123No Hit
GGGCCCGCTGGGTCATGGGCTTGTCGCCAGGGTTGGGGCTCACAGCAAGG22.0408163265306123No Hit
GTGGAACCATCCGCGCTGGTGGATCGAGCGCCTCAGGCGCGACCATCCTC22.0408163265306123No Hit
GATAGTAATTGGTGTTTCGTCCAATAATTTTTCTGATTGTGTGGAACTGC22.0408163265306123No Hit
GGCGGGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCTGCCGT22.0408163265306123No Hit
GCTATGACGTACATCTCTCACTTTCTGCCCTGGACATTCTCTGACATTAT22.0408163265306123No Hit
GGGTATGGTAGCCCTGTTTAGGAATCAAGTCTACAGCAGTAAAGCTCTGC22.0408163265306123No Hit
GGTCATCTCTGTGGTCCTGGGTCTGGTCTCCACATTCATTCGCAAGGCGG22.0408163265306123No Hit
GTTGGGGGTGGGACAGGGGGCAGCCCTGTGTCCTCAAGGCACCCTCATTC11.0204081632653061No Hit
ATTTAGAACCATTATCAAGTTTGTATCGGGGCCAAGTGGTGTTGCAGAAA11.0204081632653061No Hit
CGGAGATGTGTATAAGAGACAGGCTCAATTTGAAATAATTCTCTCAGCCA11.0204081632653061No Hit
ATCTGGCGCAATGCGCGCCGCTGGGTGGGCTGAGACTGATGCTCGACCTC11.0204081632653061No Hit
ACTCTTGTTTGCCAACCCAGAGCCAGCAGTGGTGGCAATCAGTATTTTCT11.0204081632653061No Hit
ACTTGAGAGGGATGAAGCGGGAGGAGTGGGTGGCCCCGATGCCGGGCCGG11.0204081632653061No Hit
AGTCTGAAAGGGGCCTTCCAATAAGCACTGTTTGTACATCCAATAAGTGA11.0204081632653061No Hit
TCTTAAATGTCCAACCAAAAAATATTTAAAATGGTGTCTGAGTAGGAGAA11.0204081632653061No Hit
CTTCTCCACAGAGCAGTCAGGCAGTGGCACAGCTGCCCAGGGAGTGGGGG11.0204081632653061No Hit
GTTTATTACTCTTTTTTGAATGTTGTCAAAACTAGTTAATTGGAAGTTAA11.0204081632653061No Hit
CCCTGTTAAATGTGCCACCCATGTTTGCAAGCGTGACCCTCCAAGCCATG11.0204081632653061No Hit
GGGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCTGCCGTATC11.0204081632653061No Hit
GGGTTTTGAGGTGTCAACATCAGTCTGATGGTGCTAAAGCTGTCTCTTAT11.0204081632653061No Hit
CTTTCGCTACGTCATTGATCAAATGAATAATGTGCTTCGCCATGTAATAG11.0204081632653061No Hit
ACACGGAATACACCGCCGTTAACACCAACGTCTTCACCGAAAATTAAAAC11.0204081632653061No Hit
CCTTTGAATGGAATCAAAGGGAATGATTGAAAGGAATCGAATGCCATCAT11.0204081632653061No Hit
GTAAAAGAACCTTCAGTACAAGAGGCTACTTCTACTAGTGACATTCTGAA11.0204081632653061No Hit
ATGGAATGGAATGGAATGCAATGGAATTGAATCAACCCGAGTACAATGGA11.0204081632653061No Hit
AACCAGACATGGGGGAAATCGCCAGCTTCGATAAGGCCAAGCTGAAGAAA11.0204081632653061No Hit
CCGTTCGTGCGCGACGGCGACGAGCGGCGCACGGCGACGCTGAACGACTT11.0204081632653061No Hit
TTTTTTATCAGGGGCTTGAGCATCTGAGGATTTTAGTATCCTCAGGAGTC11.0204081632653061No Hit
GTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACCATACTCCCC11.0204081632653061No Hit
GAACTTTTCTGTAGGTCAGTTTTAGAACTGCTGTGAAAAGTGAAGGTTGC11.0204081632653061No Hit
CTGCAGTGGAACCGTCCTTGGGCAAAGAGGAGTTATTCCAGATGGGGCCG11.0204081632653061No Hit
AGAGGGAGTGTTCTAGAAAGTGGTTCAGTCCTTAGCAAAATGCCCACAGA11.0204081632653061No Hit
GAATAGAATGGAATCAACGAATGGACTCGAATGGAATAATCATTGAACGG11.0204081632653061No Hit
ACCTTGAGCTTGTTGAGTCCGTGCTCGGCGGGCTTGAAGTCTGCCGGCAT11.0204081632653061No Hit
CAGATGCCCAGTGTGTGTTTTTCCCCACCACAGGTCCATGTGTTCTCATC11.0204081632653061No Hit
NTACGTGGTCACTGTGGTGGGGAACCTGGGCTTGATAACCCTGATAAGGC11.0204081632653061No Hit
GAAATGTACCGTCCAGCGAGTTGCAGATCTACACTTGGATGGATGCAACT11.0204081632653061No Hit
TCCCTAGCCCTGCCCTGCGGGCGAAGAGGCCCTGCTGGGCCAGGAGGGCG11.0204081632653061No Hit
TGTCAGATCAGTCTCTTCCACAAAAGAATTGTTTCTTGATTTCACAGACT11.0204081632653061No Hit
CCTGCCCACTTACCCACTCAGCCCCACTTTAGGGGCTGTCTCTTATACAC11.0204081632653061No Hit
TATTTGCTCTTAATGAAAGAAAGAGTAAATGGTGAGGTAGACCAGTAGTA11.0204081632653061No Hit
TAAATATGCTCACCCCAGTCGATGATGTATGATGAAGCTGTCTCTTATAC11.0204081632653061No Hit
GGTTCGAATCCCGTCTTCCGCTTATTTGGTTTCGGGATTTTGACACGACG11.0204081632653061No Hit
GTTCCAATCTGTGAGTTGAATACTCACAACACAAAGAAGTTACTGAGAAT11.0204081632653061No Hit
CTCCCAGGCCGTGCACGCAGGGAGGTCGCCAAGCAGACACAGAAATCCCC11.0204081632653061No Hit
GTCCACTGGTCAACTCACAGGGCAGTGCCACCCCTCAAGGGCCCTCTAGT11.0204081632653061No Hit
GGGGAGCTCAGGGCCTCTTGGAGGCAGGGCTTGAGTGGGGCATGGCTAGA11.0204081632653061No Hit
TCCTCGTTCAGGGCGATGTAATCCTTGCCGTCGTAGGCGTACTGGTCATA11.0204081632653061No Hit
GGGGTCTCAAACAGGTTGACATGCACCGCGTTTTTGTTCCAGTTACCCAC11.0204081632653061No Hit
CAGGATGGAGAGAGGGTTTAAGGCTTAGAGGTTTAGGCTGTTGTCATTTT11.0204081632653061No Hit
CTAACCAAGAATGTTTATCTAGGAACATGAAAATTTACTTAATTTAAAGA11.0204081632653061No Hit
GCATTATTTTCTTTAATCCTCACTAAAACCTCTAAAATAGGTCTCGTTAG11.0204081632653061No Hit
GCCGCCTTTCCGGCCGCGCGCCGGCCGGGCGCGACCCGCTCCGGGGACAG11.0204081632653061No Hit
GCGCAGGAACGGCAGCATGCGCACCCCGGAGAGACGCAGGACGCTACCGA11.0204081632653061No Hit
ACATCGAGATCCGGAAAGCGCGTGGCGCCGCGCGTGTACCAGACCCAGCC11.0204081632653061No Hit
GTCCCTCCAGTGCTGGGTGATCTTAGTTAAGGCTTTGATCTTACTTTGGG11.0204081632653061No Hit
GCTTCGGTTTGAATTTGCTCTACCTCCACAAATAGCTAAGACATGTTCCT11.0204081632653061No Hit
GAATGGAATGGAATGGAATGCAATGGAATGGAATGGAATCAACCCGATTG11.0204081632653061No Hit
CATCTAGTGCAGGCAACCGCACTCAACCACCTTATCCACAACTCCTGTCT11.0204081632653061No Hit
GTTTATTGGTCGTTAAATACTATGGTTTTGCAATATGATTGATGGTAAAA11.0204081632653061No Hit
GGCCAACAGCACCGTGTGGCTGAGAACCCAGCTTTCTCGCCCCCTGGATC11.0204081632653061No Hit
GCTTTTACTGACTTCCTGTGACTTACAGCAGGGGTCCCGAAACCCCAGGC11.0204081632653061No Hit
GCCGACCAAAGAGACCATTGAGCAGGAGAAGCGGAGTGAAATTTCCTAAG11.0204081632653061No Hit
GGCAAGAGTAGAAGTCATATCTCCAACATACATCTCTGCTTCCCCTTATA11.0204081632653061No Hit
CCTCCATGCCCTGCTCGATGCGCGCGAGCATGTCGTTGAGGGTGTCCACG11.0204081632653061No Hit
ATAAACAACTGTATAACAAAAAAATCCCATTTCGTTGGCAACCGATGCAG11.0204081632653061No Hit
CTTCGACTCCGTGCCGGCGGCAAGCCGGCGGATGTTCTCGCGGTGCCGCC11.0204081632653061No Hit
ATCTTCAGCACCTGCCCGGCCACCGACGAATCGCTGCGCGCATAGCGCTC11.0204081632653061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)