FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003667092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCGAGGTTCTCGGTGCCGGAGCGGCCCAGCAAGCTCGACCCGTTCGCC33.061224489795918No Hit
TCTGCGCGGCGGCGTCCTGCACCGAGCAGGCACCGTCGGCAAAGCCGGGC22.0408163265306123No Hit
CATAAAAAGGAATGAAATAATGGCATTCACAGCAACTTGGATGGAATTGA22.0408163265306123No Hit
CCCCTGCAGTATACATGATTTTGGATTGCTTTCTTTTTATGGTATTTTCT22.0408163265306123No Hit
CATGAATCAGAGACACGAGGAACTGGGCAGGCCGCACGTTCATGGGAGAC22.0408163265306123No Hit
GCCGAGGCCGCGCCAGGTCTTGGGCCTCCTGACCCTAGACCACGGACATT22.0408163265306123No Hit
GGACAAGTGGAAGCCAGACTTGGCACAGACAGACCAGGCCTGGCAACGGG22.0408163265306123No Hit
CTGATTGGTAGTGAAGAGGCTGCGGAGGAGTTTGAGGATGGGCTGGCTAT22.0408163265306123No Hit
GCCGCAGAGGGTTCCTGATGCTACTTTCTACTTCCAGTCTATTTGGAAAT22.0408163265306123No Hit
GTGTTGAGGTATAGACCCTGGGTCAAATCCAGAAGCTATTCTCTCTTTAC22.0408163265306123No Hit
TTGCGCACCTGCGATGACGTGGCCTGGTTCTAGTTCCGCCAACTGTGCGA22.0408163265306123No Hit
GAACCACCCCATAATGTCAGAGAATGTCCAGGGCAGAAAGTGAGAGATGT22.0408163265306123No Hit
CTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTACGAGAGGAA22.0408163265306123No Hit
ACAATGAGAACAACCAGAAAAATTGCCAGAGTCATACAAAAGCTGTCTAT22.0408163265306123No Hit
CCACGCTGCTGCTCGATGCGCTCAAGGGCTGGGTGCCGGTGTTCCTGATC22.0408163265306123No Hit
ACTTTTTCTATGATAGGGAATATGAAACAGAATGTTAAATAGATTTTTGA22.0408163265306123No Hit
GCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCAC22.0408163265306123No Hit
CTCTAGCTGTTCTTCTCTGTCTTTCTTGCAAGGTCATCATCTATTATTAA22.0408163265306123No Hit
ATTCATATCTAGCTGCTGAAGTTAACCGTTACCTGGGTACTGACCGCAGC11.0204081632653061No Hit
ATGAAAATGAAGAACGTGTTGGAAGGTCTGACAAAAACCATTTTTAAAGA11.0204081632653061No Hit
ATTCGCAGCGTGTCGGCCGCGTTCGGGCCCGACGTGACCGAGCCCATGAA11.0204081632653061No Hit
GGGTATACATACGCCAACACATTGTACACTTTTGATACGTGCAGTTTATT11.0204081632653061No Hit
CTTCTAGGTGAATACGATCTTGATCGGGATCTATGGCGCCGTCTAGGTCG11.0204081632653061No Hit
GTGATAGACTGGATAAAGAAAATGTGGTACATATACATCATGGAATACTA11.0204081632653061No Hit
CCCACATTGCAGCCCAGGGCTGCTCACCACCCCCCTTCTCCGTGTCTCTA11.0204081632653061No Hit
ATGTTAATAAAAAACACAAGGAGTTTGTGGGTAACTGGAACAAAAACGCG11.0204081632653061No Hit
TGTTTATAGGATGCCTAAGGACCCTCAGCAGGTGGGAAGAGGATTGATTC11.0204081632653061No Hit
GGTCAGCAGGGTGGTGCGCGTGGGGCGCACGCCGTCGAGCAGCCAGCGCA11.0204081632653061No Hit
CTCCCTGTCTGACAGAGGACTCCTGCCCGTTTAGGTGTCACACGATCCCC11.0204081632653061No Hit
GAGTGCCCAGGTTCACAGTGCAGCTTGTGGCTCGTGTCCATCTTGCAGGT11.0204081632653061No Hit
GTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGA11.0204081632653061No Hit
CTAATAGACTGGCAAGTTGAGGATGAGTGGAAGATGCAGGCAGGCAGCTA11.0204081632653061No Hit
GTAGAACAAAATATATGGATTTCAGCCTGGCACAGAAGACCCAGTGTTGC11.0204081632653061No Hit
GTACAGCCTTGAACTAAGTTAAAACCTGGATTAAAATCTCATCATATAAG11.0204081632653061No Hit
CCTGTACCCGGTGTTCTTCGGCTTCCAGGGCGGCAAGGGCGTGGCCACGG11.0204081632653061No Hit
GAGATGGGTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGAT11.0204081632653061No Hit
CCGCACCGTGGCCATGGCCAGCGCGCTGTTCATCATTCTTGGCGGCGCGC11.0204081632653061No Hit
GCCTGGCACCGCTCGGCGTGTTCGGCGCGGTGGCCTTCACCACCGCCCGC11.0204081632653061No Hit
CAACAAGAGTTAGGATTAGACACAAAAACAAGACAAAAACTTGTTTTTTT11.0204081632653061No Hit
AACACTTTCAGGACTCAGGTGTAGAGGAAATGATGTCAGTGCACTGCAAC11.0204081632653061No Hit
GCACATCGGTTGATTCATACGAGTTGGTAAAAATATTGATTTTTACCCCG11.0204081632653061No Hit
CTGCCAGGCCGCGCCGGCATCCGCGCCCTGCACCGCCCGGCCCAGCGCAT11.0204081632653061No Hit
CTATCTGCTTCATCCGCCAACTAATATTTCACTTTACATCCAAACATCAC11.0204081632653061No Hit
GAGTCTGCACGCCTCATCGCCTGAGGCGAAGTGATTGCTCCACAAGCCTG11.0204081632653061No Hit
GCAGCGTACTTGGCACTTCAGTTTCAAACACGTAGTCCTTTAAAACTTGG11.0204081632653061No Hit
CTGGTTGATTCCATTCCTTTCCATTCCACTCGAATACATTCCCTCCTATT11.0204081632653061No Hit
CCCCTAAAGTGGGGCTGAGTGGGTAAGTGGGCAGGCTGTCTCTTATACAC11.0204081632653061No Hit
GGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTC11.0204081632653061No Hit
GTTGAAGACTGGCCTTGAGAGAACAGTGTGGTGTTGAGGCCACCTGGGCA11.0204081632653061No Hit
CTTTAGCACCATCAGACTGATGTTGACACCTCAAAACCCCTGTCTCTTAT11.0204081632653061No Hit
AGGCTGACAATACTCCAAAACAAACTGTTCTTGATTTAATGGATATCATG11.0204081632653061No Hit
AGCCCGCGCCGCTGATGATGGGCGCGATGGTCGAGAAGATGAAGCAGTCG11.0204081632653061No Hit
CTATAATATCCCGGGGCAAACCGGAGAATTTGGCAGTCCGATTGGGGGGG11.0204081632653061No Hit
GCAAACCCCATCCCATAGACACCCAACAAAAGGAGAAAACACACCTGGGG11.0204081632653061No Hit
ATTTTATTTCGGTGAAAAAGAGTTTTATGGAATAACGTCTGTAATTTAGA11.0204081632653061No Hit
CCATTCCATTATTCCATTCTATTCCATTTCATGATGATTCCATTCGATTC11.0204081632653061No Hit
CTCTCGTACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGT11.0204081632653061No Hit
GTCTGTGGCCTGGGGTTTCGGGACCCCTGCTGTAAGTCACAGGAAGTCAG11.0204081632653061No Hit
CAGCGGGCTCAGAGGGTCCAACTCCAGACACTGCATCCATGGCTGTCCTA11.0204081632653061No Hit
GTACTTAATTAGTAAGGAGATTTTAAGTCTGGAAGTTAACTGGAACCATT11.0204081632653061No Hit
CTTCATCATACATCATCGACTGGGGTGAGCATATTTACTGTCTCTTATAC11.0204081632653061No Hit
GAAGACGCACCTGCGGGACATGATCATCCTACCCGAGATGGTGGGCAGCA11.0204081632653061No Hit
GTGTGTGCCCAGGGACAGGAAATGCTCCGAAGTCACTTCTACACATGATG11.0204081632653061No Hit
GATTCCGTTCAATGATTATTCCATTCGAGTCCATTCGTTGATTCCATTCT11.0204081632653061No Hit
AGCCAGGTGTATAAGGGGAAGCAGAGATGTATGTTGGAGATATGACTTCT11.0204081632653061No Hit
GCCCACCACCGTGCGCTCGGTGATCATGGTGCGCGATGCCGAAGACTCCA11.0204081632653061No Hit
GAGTTGTGGATAAGGTGGTTGAGTGCGGTTGCCTGCACTAGATGCTGTCT11.0204081632653061No Hit
GATTTGAAACACTCTTTTTGCGGAATTTGCAAGTGGAGATTTCTAGCCAT11.0204081632653061No Hit
AGCCATGGATGTGTCCTTGGTCACCAATGCAGATGCTACTGGGGCAGCCA11.0204081632653061No Hit
GAATTTAATTCATTATTTTATTTCATCTTTTTACCCTTTCTGCCATCGTC11.0204081632653061No Hit
CCCCCAGGGATGGTGACCCCCACTCCCTGGGCAGCTGTGCCACTGCCTGA11.0204081632653061No Hit
GTTTCACCAACGTCACCAACGGTGTGACGCCGCGTCGCTGGCTAGCGGTA11.0204081632653061No Hit
GGGCAACAAGAGCGGAACTCCACCAAAAAAAAAAAAAAAAAAAAAGAAGG11.0204081632653061No Hit
GTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCGAGGGGGGAGCCGCGGG11.0204081632653061No Hit
ACTATCCTTCGCCCACTGTCTGGCACTCCATAGTGAGATGAATCCGGTAC11.0204081632653061No Hit
CTTAAGGAGCAAGCAACAGAAACAAACTCTGGCTACAAGAAATGAAAGGG11.0204081632653061No Hit
CCCCTGCACTCGGTTTGATTCCATTCCATTCCATTCCATTCCATTCCATT11.0204081632653061No Hit
TCTTTCTAGCTTCTGGGTAGACTTCTTTTACTAAGCTTGTCAGTTCTTTC11.0204081632653061No Hit
CCGCAGGCCAGGGTGGGAGGCCACAGGGCATCCTTCCTGCAGGTGGGCCT11.0204081632653061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)