FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003667574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCAGCTGGTGCGCCAGGCCCTGCCCACCGCGCTGGGTTTCCTATCGCTG211.76470588235294No Hit
AATTTACCTTAATTTGACTGCCAATCAACTTTTCAGGAGAACATTGAATT15.88235294117647No Hit
GGTGTGAGCCACCACACCTGGCCTCTGTACATATCTTAGGATTTCTTTCT15.88235294117647No Hit
CCAAGCATTTACACAGTATTTCATTGATTCTTCATAGAAGCTCTTTGAGG15.88235294117647No Hit
CCGGTAGATAGCCCGGCGGCGTAGCGCCGCGGGATGGTCTCAAGGCCATC15.88235294117647No Hit
AAATAATGCCACAGTTTTGAAGTCTTGTCAGCTGAGGCAATGACTATTAA15.88235294117647No Hit
CCCGAGGTGCGTTGGTCGACAGCCATAGCGGGCCTCCCTTCCTGCGTCAC15.88235294117647No Hit
TTCCAAGTCTAAAAGGGAAAGTGGAATGTAAGATATGGCAAGGAGATTTG15.88235294117647No Hit
GTGCCAGGAAGCTCACCGGCGAGCTCTACTTCCCATTCGCGCCAGGACTG15.88235294117647No Hit
TTACAGGGCTATTTCTGTTTGCAGAACTCAACAGCCATCTCACTGTCTCT15.88235294117647No Hit
GATGGGTACAATGAAAATGATTCTGATTCGGAAACGTTTTGACTTTGGAC15.88235294117647No Hit
GTCGATCCTCTTTATGGCATCCCTGTGGGCAAAGGTGGCAGGGGGGAGGG15.88235294117647No Hit
GGCGCATAAAGAGGGCGTCGACAAGCGAGCGATCCAAGTGCTCCGAAAGG15.88235294117647No Hit
GTCTCAGATAAGACTTGGACTTTGACTTTTGACTTAATGCTGCAATGAAT15.88235294117647No Hit
GTGGGCGATGACTCCAGCGTGTACGTGGTGGATCCCTCCCACGATCTCGA15.88235294117647No Hit
GTTGGCGCGGTTTCTATGATGACGGGTCTCCTCTTCGCAGGTTTTGCCCG15.88235294117647No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)