FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003667575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCTATGCCTGTCCCAACCTGGTCCTCCTGTTCTACAGAGGAAGAACCC313.043478260869565No Hit
TGAAAGCGCTGATCTGGCTCGGACTGTACTTCTTGCCCCGGACGTCGACC28.695652173913043No Hit
TAGGGGCACAGGGTTTCAGAACCAGAACAAATCTGCCCAGACATTCCCTG14.3478260869565215No Hit
GTGCGATCTCGGCTCACTGCAACCTCCACCTCCCCGGTTCAAGCCTGTCT14.3478260869565215No Hit
GGGAATTCAGGTGCCTGCCACCACGCCCAGTTAATTTTTGTATTTTTAGT14.3478260869565215No Hit
AACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTG14.3478260869565215No Hit
CAACGGCGAGGGGAAGTGGGTAAGGCATGTAAATTCATCATGTTGGCGAA14.3478260869565215No Hit
ATCCACTACCGCGAAGATATTACTGATGGTTTAGAGAATGCGCCACAGAC14.3478260869565215No Hit
GGCCTGTCCCTGCTGCAGCGCCAGGACCCCCGGAGGTAGAGGCTGTCTCT14.3478260869565215No Hit
TGATGCCATCATCTGGAAATACCTGTAGGCTTGTGTCTAGACCAGTCTTT14.3478260869565215No Hit
GGGAACAGAGTATTCACCAGGAGGCAAACTGGGGGGCAATCAACCAATCC14.3478260869565215No Hit
TCTTTGTTTTGCCTTCACCCCAACAGCAGTCGGTCTAAAGGAGGAAGCTC14.3478260869565215No Hit
AGCCAGTTGCTCAGTCTCAGAGGGTGTGGGCAGGTGCACAGGCCTGAAGG14.3478260869565215No Hit
ATGTGGGTCTGTTCGACAGTCAGACCGAAATGCTCGCGAATGGCAGCGAT14.3478260869565215No Hit
AAGCAGATCCTTGGCATTGTCTTTCCTTTATAAAATCATCCATGCTGTCT14.3478260869565215No Hit
GGTTGCCGACCGCTTCATGGATCTCTGGCGGGCGGTCGTGACCGCGCAGG14.3478260869565215No Hit
GCCTAATCTTAGTCTGCCCTCTCCTCACTCGTTGACTGCAGGCCTTTAGG14.3478260869565215No Hit
ATTGTGGGCAAGGTGCTATTGAAAGCCTTGCAGAGGTCAGCGGCCTCCTG14.3478260869565215No Hit
ACCCAGGAAATGCCATTGCCTACGCCAATGCCGAACGGGCCGAGCAGGAA14.3478260869565215No Hit
ACCTATAATATTCAACTTTACTCGGATATAGTCAAAACAGTTCTTGTTTT14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)